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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c1s1iV_ | PDB header: ribosome | Chain: V: PDB Molecule: 60s ribosomal protein l28; | PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. |
Added to library: Tue Mar 16 14:20:23 2010 | |
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Links to external resources | |
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Sequence | T | K | T | R | K | H | R | G | H | V | S | A | G | K | G | R | I | G | K | H | R | K | H | P | G | G | R | G | M | A | G | G | E | H | H | H | R | I | N | M | D | K | Y | H | P | G | Y | F | G | K | V | G | M | R | Y | F | H | K | Q | Q | A | H | F | W | K | P | V | L | N | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | T | T | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | T | T | S | ![]() | ![]() | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | D | K | L | W | T | L | I | P | E | D | K | R | D | Q | Y | L | K | S | A | S | K | E | T | A | P | V | I | D | T | L | A | A | G | Y | G | K | I | L | G | K | G | R | I | P | N | V | P | V | I | V | K | A | R | F | V | S | K | L | A | E | E | K | I | R | A | A | G | G | V | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | S | S | S | S | S | S | S | ![]() | ![]() | S | S | S | S | S | S | S | T | T | T | T | T | T | S | S | S | S |   | . | . | . | ||||||||||||||||||||||||||||||
Sequence | E | L | I | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) |
Download: | PDB structure | FASTA sequence |
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