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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title |
|---|---|---|---|
| c1s1iO_ | PDB header: ribosome | Chain: O: PDB Molecule: 60s ribosomal protein l18; | PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. |
| Added to library: Tue Mar 16 13:56:36 2010 | |
| Links to external resources | |
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| 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
| Sequence | D | N | V | Y | L | K | L | L | V | K | L | Y | T | F | L | A | R | R | T | D | A | P | F | N | K | V | V | L | K | A | L | F | L | S | K | I | N | R | P | P | V | S | V | S | R | I | A | R | A | L | K | Q | E | G | A | A | N | K | T | V | V | V | V | G | T | V | T | D | D | A |
| Predicted secondary structure |  | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |  | | | | | | |  | ||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | | | | | | | | | | T | T | T | T | T | T | T | S | S | S | T | T | T | | | | | | | T | S | T | T | T | S | S | S | S | S | S | S | S | S | S | S | S | S | | | S | S | S | S | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
| Sequence | R | I | F | E | F | P | K | T | T | V | A | A | L | R | F | T | A | G | A | R | A | K | I | V | K | A | G | G | E | C | I | T | L | D | Q | L | A | V | R | A | P | K | G | Q | N | T | L | I | L | R | ||||||||||||||||||||
| Predicted secondary structure | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | S | S | T | T | T | T | T | T | S | S | S | S | S | S | S | T | T | T | S | S | S | S | | |
| Download: | PDB structure | FASTA sequence |
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