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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title |
|---|---|---|---|
| c1s1iJ_ | PDB header: ribosome | Chain: J: PDB Molecule: 60s ribosomal protein l11; | PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. |
| Added to library: Tue Mar 16 12:26:45 2010 | |
| Links to external resources | |
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| 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
| Sequence | N | P | M | R | D | L | K | I | E | K | L | V | L | N | I | S | V | G | E | S | G | D | R | L | T | R | A | S | K | V | L | E | Q | L | S | G | Q | T | P | V | Q | S | K | A | R | Y | T | V | R | T | F | G | I | R | R | N | E | K | I | A | V | H | V | T | V | R | G | P | K | A |
| Predicted secondary structure |  | | | | | | |  |  | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | T | T | T | S | | | | S | S | S | S | S | S | S | S | S | S | S | T | T | S | S | S | S | S | S | S | S | S | S | S | S | S | S | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
| Sequence | E | E | I | L | E | R | G | L | K | V | K | E | Y | Q | L | R | D | R | N | F | S | A | T | G | N | F | G | F | G | I | D | E | H | I | D | L | G | I | K | Y | D | P | S | I | G | I | F | G | M | D | F | Y | V | V | M | N | R | P | G | A | R | V | T | R | R | K | R | C | K | G |
| Predicted secondary structure | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | ||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | S | S | S | S | S | S | S | S | S | S | T | T | S | S | T | T | S | T | T | S | S | S | S | S | S | S | T | T | T | | | | S | S | S | T | T | T | S | S | S | S | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | ||
| Sequence | T | V | G | N | S | H | K | T | T | K | E | D | T | V | S | W | F | K | Q | K | Y | D | A | D | V | |||||||||||||||||||||||||||||||||||||||||||||
| Predicted secondary structure | | | | | | | | | | | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | S | S | S | | | | | S | S | S | B | T | T | B | S | S |
| Download: | PDB structure | FASTA sequence |
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