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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c1s1iH_ | PDB header: ribosome | Chain: H: PDB Molecule: 60s ribosomal protein l9-a; | PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. |
Added to library: Tue Mar 16 14:22:46 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | E | Q | Q | I | E | V | P | E | G | V | T | V | S | I | K | S | R | I | V | K | V | V | G | P | R | G | T | L | T | K | N | L | K | H | I | D | V | T | F | T | K | V | N | N | Q | L | I | K | V | A | V | H | N | G | G | R | K | H | V | A | A | L | R | T | V | K | S | L | V | D |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | S | T | T | S | S | S | S | S | S | S | S | T | T | T | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | N | M | I | T | G | V | T | K | G | Y | K | Y | K | M | R | Y | V | Y | A | H | F | P | I | N | V | N | I | V | E | K | D | G | A | K | F | I | E | V | R | N | F | L | G | D | K | K | I | R | N | V | P | V | R | D | G | V | T | I | E | F | S | T | N | V | K | D | E | I | V | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | T | T | T | S | S | ![]() | ![]() | ![]() | ![]() | B | S | S | S | S | S | S | T | T | T | T | S | S | S | S | S | S | T | T | ![]() | ![]() | S | S | S | S | S | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
Sequence | S | G | N | S | V | E | D | V | S | Q | N | A | A | D | L | Q | Q | I | C | R | V | R | N | K | D | I | R | K | F | L | D | G | I | Y | V | S | H | K | ||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | S | T | T | T | S | T | T | T | S | S | S | S | S | T | T | T | S | S | S | B | T | T | B | S | B |
Download: | PDB structure | FASTA sequence |
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