PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1s1hG_

Fold library id	PDB Header	Molecule	Title
c1s1hG_	PDB header: ribosome	Chain: G: PDB Molecule: 40s ribosomal protein s5;	PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i.

Links to external resources
Added to library: Tue Mar 16 14:39:21 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R Y A N K R F R K A Q C P I I E R L T N S L M M N G R N N G K K L K A V R I I K H T L D I I N V L T D Q N P I Q V V V D A I T N T G P R E D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S
T T
S S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T T R V G G G G A A R R Q A V D V S P L R R V N Q A I A L L T I G A R E A A F R N I K T I A E T L A E E L I N A A K G S S T S Y A I K K K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S
S S S S S S T T
S

. . . . . . . . . 150

Sequence E L E R V A K S N R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	Y	A	N	K	R	F	R	K	A	Q	C	P	I	I	E	R	L	T	N	S	L	M	M	N	G	R	N	N	G	K	K	L	K	A	V	R	I	I	K	H	T	L	D	I	I	N	V	L	T	D	Q	N	P	I	Q	V	V	V	D	A	I	T	N	T	G	P	R	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S									S	S	S															T	T																				S	S	S																S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	T	R	V	G	G	G	G	A	A	R	R	Q	A	V	D	V	S	P	L	R	R	V	N	Q	A	I	A	L	L	T	I	G	A	R	E	A	A	F	R	N	I	K	T	I	A	E	T	L	A	E	E	L	I	N	A	A	K	G	S	S	T	S	Y	A	I	K	K	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S																													S				S	S	S	S												S	S	T	T			S
	.	.	.	.	.	.	.	.	.	150
Sequence	E	L	E	R	V	A	K	S	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T