PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1s1hE_

Fold library id	PDB Header	Molecule	Title
c1s1hE_	PDB header: ribosome	Chain: E: PDB Molecule: 40s ribosomal protein s2;	PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i.

Links to external resources
Added to library: Tue Mar 16 12:11:11 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G L Q D E V M N I K P V Q K Q T R A G Q R T R F K A V V V V G D S N G H V G L G I K T A K E V A G A I R A G I I I A K L S V I P I R R G Y W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S
S S S S
S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G T N L G Q P H S L A T K T T G K C G S V T V R L I P A P R G S G I V A S P A V K K L L Q L A G V E D V Y T Q S N G K T R T L E N T L K A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T S
S S
T T
T T S
S
T
T T T T

. . . . . . . . .

Sequence F V A I G N T Y G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	L	Q	D	E	V	M	N	I	K	P	V	Q	K	Q	T	R	A	G	Q	R	T	R	F	K	A	V	V	V	V	G	D	S	N	G	H	V	G	L	G	I	K	T	A	K	E	V	A	G	A	I	R	A	G	I	I	I	A	K	L	S	V	I	P	I	R	R	G	Y	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T															S	S	S										S	S														S	S						S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	T	N	L	G	Q	P	H	S	L	A	T	K	T	T	G	K	C	G	S	V	T	V	R	L	I	P	A	P	R	G	S	G	I	V	A	S	P	A	V	K	K	L	L	Q	L	A	G	V	E	D	V	Y	T	Q	S	N	G	K	T	R	T	L	E	N	T	L	K	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S				T	T	S		S	S							T	T										T	T	S				S												T														T	T	T	T
	.	.	.	.	.	.	.	.	.
Sequence	F	V	A	I	G	N	T	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)