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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1s0bA_

Fold library idPDB HeaderMoleculeTitle
c1s0bA_PDB header: toxin, hydrolaseChain: A: PDB Molecule: botulinum neurotoxin type b;PDBTitle: crystal structure of botulinum neurotoxin type b at ph 4.0


Added to library: Tue Mar 16 13:38:17 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence PVTINNFNYNDPIDNNNIIMMEPPFARGTGRYYKAFKITDRIWIIPERYTFGYKPEDFNKSSGIFNRDVC
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Known secondary structure (DSSP)







TTS


SSS
GGGTT
S

TT
S


TT

GGGGS

SS
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EYYDPDYLNTNDKKNIFLQTMIKLFNRIKSKPLGEKLLEMIINGIPYLGDRRVPLEEFNTNIASVTVNKL
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Known secondary structure (DSSP) B
TTTT
STS



S

TTS
TT


STTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ISNPGEVERKKGIFANLIIFGPGPVLNENETIDIGIQNHFASREGFGGIMQMKFCPEYVSVFNNVQENKG
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Known secondary structure (DSSP)
S
SS




S


SBTT



TTGGGTTS




SS


SSS
ST
 .........220.........230.........240.........250.........260.........270.........280
Sequence ASIFNRRGYFSDPALILMHELIHVLHGLYGIKVDDLPIVPNEKKFFMQSTDAIQAEELYTFGGQDPSIIT
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Known secondary structure (DSSP) T
TTS

S

TT




S
B
B

SSTTB




B

TTGGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PSTDKSIYDKVLQNFRGIVDRLNKVLVCISDPNININIYKNKFKDKYKFVEDSEGKYSIDVESFDKLYKS
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Known secondary structure (DSSP)

SS
TT

TT

TTS


 .........360.........370.........380.........390.........400.........410.........420
Sequence LMFGFTETNIAENYKIKTRASYFSDSLPPVKIKNLLDNEIYTIEEGFNISDKDMEKEYRGQNKAINKQAY
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Known secondary structure (DSSP) TS
TT



S
TTS




S
TT
TTT
BTTTBT

GGGT
SGGGGGGBTTT
GGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence EEISKEHLAVYKIQMCKSVGICIDVDNEDLFFIADKNSFSDDLSKNERIEYNTQSNYIENDFPINELILD
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Known secondary structure (DSSP)


GGG






GGGSB

B
GGGS

GGGS

SS






S



 .........500.........510.........520.........530.........540.........550.........560
Sequence TDLISKIELPSENTESLTDFNVDVPVYEKQPAIKKIFTDENTIFQYLYSQTFPLDIRDISLTSSFDDALL
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Known secondary structure (DSSP) STTS

S



S







B





S



STT


TT



S
 .........570.........580.........590.........600.........610.........620.........630
Sequence FSNKVYSFFSMDYIKTANKVVEAGLFAGWVKQIVNDFVIEANKSNTMDKIADISLIVPYIGLALNVGNET
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Known secondary structure (DSSP)
TT

S
T



GGGG

BGGGTBS


TT

TTTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence AKGNFENAFEIAGASILLEFIPELLIPVVGAFLLESYIDNKNKIIKTIDNALTKRNEKWSDMYGLIVAQW
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Known secondary structure (DSSP) TSS
GGGGG
SS













SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence LSTVNTQFYTIKEGMYKALNYQAQALEEIIKYRYNIYSEKEKSNINIDFNDINSKLNEGINQAIDNINNF
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Known secondary structure (DSSP) TTS
T



 .........780.........790.........800.........810.........820.........830.........840
Sequence INGCSVSYLMKKMIPLAVEKLLDFDNTLKKNLLNYIDENKLYLIGSAEYEKSKVNKYLKTIMPFDLSIYT
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Known secondary structure (DSSP) TTGGGTGGGTTTTS




GGGT
 .........850.........860.........870.........880.........890.........900.........910
Sequence NDTILIEMFNKYNSEILNNIILNLRYKDNNLIDLSGYGAKVEVYDGVELNDKNQFKLTSSANSKIRVTQN
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Known secondary structure (DSSP)


GGGGTT
SSS


TT

TTS
SSTT



 .........920.........930.........940.........950.........960.........970.........980
Sequence QNIIFNSVFLDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMKNNSGWKISIRGNRIIWTLIDINGKTKS
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Known secondary structure (DSSP) TTS



SS






GGG
TTTT
TT

 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence VFFEYNIREDISEYINRWFFVTITNNLNNAKIYINGKLESNTDIKDIREVIANGEIIFKLDGDIDRTQFI
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Known secondary structure (DSSP)

SS
SS
SSTTS

SSTT
TT






S
SS

TT

 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence WMKYFSIFNTELSQSNIEERYKIQSYSEYLKDFWGNPLMYNKEYYMFNAGNKNSYIKLKKDSPVGEILTR
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Known secondary structure (DSSP) SS




SB
B
TTSSB
T
TTSTT
TTSSS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence SKYNQNSKYINYRDLYIGEKFIIRRKSNSQSINDDIVRKEDYIYLDFFNLNQEWRVYTYKYFKKEEEKLF
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Known secondary structure (DSSP)
B

S

SS


B
SS
S

SS

S
SS

BTT
TTTT

SS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence LAPISDSDEFYNTIQIKEYDEQPTYSCQLLFKKDEESTDEIGLIGIHRFYESGIVFEEYKDYFCISKWYL
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Known secondary structure (DSSP) S


TT




SS

S
BSSSS



SS
T
 .........1270.........1280.......
Sequence KEVKRKPYNLKLGCNWQFIPKDEGWTE
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Known secondary structure (DSSP) TTSSS

TT
TT



TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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