| 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence |
P | V | T | I | N | N | F | N | Y | N | D | P | I | D | N | N | N | I | I | M | M | E | P | P | F | A | R | G | T | G | R | Y | Y | K | A | F | K | I | T | D | R | I | W | I | I | P | E | R | Y | T | F | G | Y | K | P | E | D | F | N | K | S | S | G | I | F | N | R | D | V | C |
Predicted secondary structure |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
|
|
|
|
|
|
|
| T | T | S |
|
|
| S | S | S |  |  |  |  |  |
| G | G | G | T | T |
| S |
|
|  |  |  |  |  |  |  | T | T |  |  |  |  |
| S |
|
|
| T | T |
|
| G | G | G | G | S |
|
| S |  |  | S |
| T | T | S |
|
  | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence |
E | Y | Y | D | P | D | Y | L | N | T | N | D | K | K | N | I | F | L | Q | T | M | I | K | L | F | N | R | I | K | S | K | P | L | G | E | K | L | L | E | M | I | I | N | G | I | P | Y | L | G | D | R | R | V | P | L | E | E | F | N | T | N | I | A | S | V | T | V | N | K | L |
Predicted secondary structure |
 |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  | B |
| T | T | T | T |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| S |
|
| T | T | S |
| T | T |  |  |
|
|
| S | T | T | T |  |  |  |  |  |
  | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence |
I | S | N | P | G | E | V | E | R | K | K | G | I | F | A | N | L | I | I | F | G | P | G | P | V | L | N | E | N | E | T | I | D | I | G | I | Q | N | H | F | A | S | R | E | G | F | G | G | I | M | Q | M | K | F | C | P | E | Y | V | S | V | F | N | N | V | Q | E | N | K | G |
Predicted secondary structure |
 |
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
| S |
| S | S |
|
|
|
|  |  |  |  |  |
| S |  |  |  |  |
|
|
| S | B | T | T |
|
|  |  |  |
|
|  |  | T | T |  |  | G | G | G | T | T | S |
|
|
|  |  |  |  |
|
| S | S |  |  |
|  |  |
|
| S | S | S |
| S | T |
  | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence |
A | S | I | F | N | R | R | G | Y | F | S | D | P | A | L | I | L | M | H | E | L | I | H | V | L | H | G | L | Y | G | I | K | V | D | D | L | P | I | V | P | N | E | K | K | F | F | M | Q | S | T | D | A | I | Q | A | E | E | L | Y | T | F | G | G | Q | D | P | S | I | I | T |
Predicted secondary structure |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
T |
| T | T | S |
|
| S |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
| S |
| B |
| B |
|
| S | S | T | T | B |
|
|
|
|
| B |
|  |  |  |  |  |  |  |
| T | T | G | G | G | G | S |
|
  | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 |
Sequence |
P | S | T | D | K | S | I | Y | D | K | V | L | Q | N | F | R | G | I | V | D | R | L | N | K | V | L | V | C | I | S | D | P | N | I | N | I | N | I | Y | K | N | K | F | K | D | K | Y | K | F | V | E | D | S | E | G | K | Y | S | I | D | V | E | S | F | D | K | L | Y | K | S |
Predicted secondary structure |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  | S | S |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
| T | T | S |
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
  | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 |
Sequence |
L | M | F | G | F | T | E | T | N | I | A | E | N | Y | K | I | K | T | R | A | S | Y | F | S | D | S | L | P | P | V | K | I | K | N | L | L | D | N | E | I | Y | T | I | E | E | G | F | N | I | S | D | K | D | M | E | K | E | Y | R | G | Q | N | K | A | I | N | K | Q | A | Y |
Predicted secondary structure |
 |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  |  | T | S |
|  |  |  |  |  |  |  | T | T |
|
|
|
| S |
| T | T | S |
|
|
|
|
|  |  |  | S |
| T | T |
| T | T | T |
| B | T | T | T | B | T |
|
| G | G | G | T |
| S | G | G | G | G | G | G | B | T | T | T |
| G | G | G |  |
  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 |
Sequence |
E | E | I | S | K | E | H | L | A | V | Y | K | I | Q | M | C | K | S | V | G | I | C | I | D | V | D | N | E | D | L | F | F | I | A | D | K | N | S | F | S | D | D | L | S | K | N | E | R | I | E | Y | N | T | Q | S | N | Y | I | E | N | D | F | P | I | N | E | L | I | L | D |
Predicted secondary structure |
 |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |
|
|
| G | G | G |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | G | G | G | S | B |
|
| B |
| G | G | G | S |
|
| G | G | G | S |
|  |  |  |
| S | S |
|
|
|
|
|
|
| S |
|
|
|  |  |  |  |  |  |
|
  | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 |
Sequence |
T | D | L | I | S | K | I | E | L | P | S | E | N | T | E | S | L | T | D | F | N | V | D | V | P | V | Y | E | K | Q | P | A | I | K | K | I | F | T | D | E | N | T | I | F | Q | Y | L | Y | S | Q | T | F | P | L | D | I | R | D | I | S | L | T | S | S | F | D | D | A | L | L |
Predicted secondary structure |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
S | T | T | S |
|
| S |
|
|
|
| S |  |  |
|
|
|
|
|
|
|
| B |
|
|
|
|
|
|  |  | S |  |  |  |  |  |
|
|
|
| S |  |  |  |  |  |  | T | T |
|
|
| T | T |
|
|
|
|  |  |  | S |
|  |  |  |  |  |  |
  | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 |
Sequence |
F | S | N | K | V | Y | S | F | F | S | M | D | Y | I | K | T | A | N | K | V | V | E | A | G | L | F | A | G | W | V | K | Q | I | V | N | D | F | V | I | E | A | N | K | S | N | T | M | D | K | I | A | D | I | S | L | I | V | P | Y | I | G | L | A | L | N | V | G | N | E | T |
Predicted secondary structure |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
| T | T |  |  |  |
|
| S |
|  |  |  |  |  |  |  | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G |
|
| B | G | G | G | T | B | S |
|
|
| T | T |  |  |  |  |  |
|
| T | T | T | T |
  | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 |
Sequence |
A | K | G | N | F | E | N | A | F | E | I | A | G | A | S | I | L | L | E | F | I | P | E | L | L | I | P | V | V | G | A | F | L | L | E | S | Y | I | D | N | K | N | K | I | I | K | T | I | D | N | A | L | T | K | R | N | E | K | W | S | D | M | Y | G | L | I | V | A | Q | W |
Predicted secondary structure |
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
T | S | S |
|  |  |  |  |  |  |  |  | G | G | G | G | G |
| S | S |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
  | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 |
Sequence |
L | S | T | V | N | T | Q | F | Y | T | I | K | E | G | M | Y | K | A | L | N | Y | Q | A | Q | A | L | E | E | I | I | K | Y | R | Y | N | I | Y | S | E | K | E | K | S | N | I | N | I | D | F | N | D | I | N | S | K | L | N | E | G | I | N | Q | A | I | D | N | I | N | N | F |
Predicted secondary structure |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
  | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 |
Sequence |
I | N | G | C | S | V | S | Y | L | M | K | K | M | I | P | L | A | V | E | K | L | L | D | F | D | N | T | L | K | K | N | L | L | N | Y | I | D | E | N | K | L | Y | L | I | G | S | A | E | Y | E | K | S | K | V | N | K | Y | L | K | T | I | M | P | F | D | L | S | I | Y | T |
Predicted secondary structure |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | G | G | G | T | G | G | G | T | T |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
|
|
| G | G | G | T |
|
  | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . | . | . | . | . | . | . | . | 900 | . | . | . | . | . | . | . | . | . | 910 |
Sequence |
N | D | T | I | L | I | E | M | F | N | K | Y | N | S | E | I | L | N | N | I | I | L | N | L | R | Y | K | D | N | N | L | I | D | L | S | G | Y | G | A | K | V | E | V | Y | D | G | V | E | L | N | D | K | N | Q | F | K | L | T | S | S | A | N | S | K | I | R | V | T | Q | N |
Predicted secondary structure |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | G |  |  |  |  |  |  |  |  | T | T |  |  |  |  |
| S | S | S |
|
|  |  |  |  |
| T | T |
|  |  |
| T | T | S |  |  |  |  |
| S | S | T | T |
|
|  |  |  |  |
|
|
  | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 |
Sequence |
Q | N | I | I | F | N | S | V | F | L | D | F | S | V | S | F | W | I | R | I | P | K | Y | K | N | D | G | I | Q | N | Y | I | H | N | E | Y | T | I | I | N | C | M | K | N | N | S | G | W | K | I | S | I | R | G | N | R | I | I | W | T | L | I | D | I | N | G | K | T | K | S |
Predicted secondary structure |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
T | T | S |
|
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
| G | G | G |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |
  | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 |
Sequence |
V | F | F | E | Y | N | I | R | E | D | I | S | E | Y | I | N | R | W | F | F | V | T | I | T | N | N | L | N | N | A | K | I | Y | I | N | G | K | L | E | S | N | T | D | I | K | D | I | R | E | V | I | A | N | G | E | I | I | F | K | L | D | G | D | I | D | R | T | Q | F | I |
Predicted secondary structure |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  |  |  |
|
| S | S |
| S | S |
| S | S | T | T | S |
|  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
| T | T |
|
|
|
|
|
|
| S |
|  |  |  |  |  |  | S | S |
|
| T | T |
|
|  |
  | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 |
Sequence |
W | M | K | Y | F | S | I | F | N | T | E | L | S | Q | S | N | I | E | E | R | Y | K | I | Q | S | Y | S | E | Y | L | K | D | F | W | G | N | P | L | M | Y | N | K | E | Y | Y | M | F | N | A | G | N | K | N | S | Y | I | K | L | K | K | D | S | P | V | G | E | I | L | T | R |
Predicted secondary structure |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  |  |  |  |  |  |  | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| S | B |
| B |
| T | T | S | S | B |
|  |  | T |
|  |  |  |  |  |  | T | T | S | T | T |  |  |  |  |  |
| T | T | S | S | S |  |  |  |  |  |
|
  | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . | . | . | 1190 |
Sequence |
S | K | Y | N | Q | N | S | K | Y | I | N | Y | R | D | L | Y | I | G | E | K | F | I | I | R | R | K | S | N | S | Q | S | I | N | D | D | I | V | R | K | E | D | Y | I | Y | L | D | F | F | N | L | N | Q | E | W | R | V | Y | T | Y | K | Y | F | K | K | E | E | E | K | L | F |
Predicted secondary structure |
|
|
|
|
|
|
|
|  |  |
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
| B |
|
| S |
|
| S | S |
|
|
| B |
| S | S |
| S |
|
|  |  |  |  |  | S | S |
|
| S |
| S | S |
|  |  |
| B | T | T |
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T |
|
| S | S |  |  |  |
|  |
  | . | . | . | . | . | . | . | . | . | 1200 | . | . | . | . | . | . | . | . | . | 1210 | . | . | . | . | . | . | . | . | . | 1220 | . | . | . | . | . | . | . | . | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | . | . | 1250 | . | . | . | . | . | . | . | . | . | 1260 |
Sequence |
L | A | P | I | S | D | S | D | E | F | Y | N | T | I | Q | I | K | E | Y | D | E | Q | P | T | Y | S | C | Q | L | L | F | K | K | D | E | E | S | T | D | E | I | G | L | I | G | I | H | R | F | Y | E | S | G | I | V | F | E | E | Y | K | D | Y | F | C | I | S | K | W | Y | L |
Predicted secondary structure |
 |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  |  | S |
|
|
| T | T |  |  |
|
|  |  |  |  |
|
|
| S | S |
|
| S |
| B |  |  |  |  |  | S | S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  | T |  |  |  |
  | . | . | . | . | . | . | . | . | . | 1270 | . | . | . | . | . | . | . | . | . | 1280 | . | . | . | . | . | . | . |
Sequence |
K | E | V | K | R | K | P | Y | N | L | K | L | G | C | N | W | Q | F | I | P | K | D | E | G | W | T | E |
Predicted secondary structure |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  | T | T | S | S | S |
|
| T | T |
| T | T |
|  |  |  |  |
|
|
| T | T |
|
|
|