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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c1rzoD_ | PDB header: hydrolase | Chain: D: PDB Molecule: agglutinin; | PDBTitle: agglutinin from ricinus communis with galactoaza |
Added to library: Tue Mar 16 12:09:27 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | A | D | V | C | M | D | P | E | P | I | V | R | I | V | G | R | N | G | L | C | V | D | V | T | G | E | E | F | F | D | G | N | P | I | Q | L | W | P | C | K | S | N | T | D | W | N | Q | L | W | T | L | R | K | D | S | T | I | R | S | N | G | K | C | L | T | I | S | K | S | S |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | ![]() | ![]() | B | G | G | G | T | T | B | B | S | T | T | T | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | P | R | Q | Q | V | V | I | Y | N | C | S | T | A | T | V | G | A | T | R | W | Q | I | W | D | N | R | T | I | I | N | P | R | S | G | L | V | L | A | A | T | S | G | N | S | G | T | K | L | T | V | Q | T | N | I | Y | A | V | S | Q | G | W | L | P | T | N | N | T | Q | P | F |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | G | G | G | T | B | T | T | S | B | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | S | S | T | T | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | S | S | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | V | T | T | I | V | G | L | Y | G | M | C | L | Q | A | N | S | G | K | V | W | L | E | D | C | T | S | E | K | A | E | Q | Q | W | A | L | Y | A | D | G | S | I | R | P | Q | Q | N | R | D | N | C | L | T | T | D | A | N | I | K | G | T | V | V | K | I | L | S | C | G | P | A |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | G | G | G | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | S | S | S | T | T | B | ![]() | ![]() | ![]() | ![]() | S | S | S |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
Sequence | S | S | G | Q | R | W | M | F | K | N | D | G | T | I | L | N | L | Y | N | G | L | V | L | D | V | R | R | S | D | P | S | L | K | Q | I | I | V | H | P | F | H | G | N | L | N | Q | I | W | L | P | L | F | ||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | S | ![]() | ![]() | T | T | S | B | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | B | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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