PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1rz4A_

Fold library id	PDB Header	Molecule	Title
c1rz4A_	PDB header: biosynthetic protein	Chain: A: PDB Molecule: eukaryotic translation initiation factor 3	PDBTitle: crystal structure of human eif3k

Links to external resources
Added to library: Tue Mar 16 12:07:35 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A M F E Q X R A N V G K L L K G I D R Y N P E N L A T L E R Y V E T Q A K E N A Y D L E A N L A V L K L Y Q F N P A F F Q T T V T A Q I L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S G G G G
G G G T
S G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K A L T N L P H T D F T L C K C X I D Q A H Q E E R P I R Q I L Y L G D L L E T C H F Q A F W Q A L D E N X D L L E G I T G F E D S V R K F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S T T S
T S T T T T
S
T T
T S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I C H V V G I T Y Q H I D R W L L A E X L G D L S D S Q L K V W X S K Y G W S A D E Q I F I C S Q E E S I K P K N I V E K I D F D S V S S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S
T
T S
S S

. . .

Sequence X A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	M	F	E	Q	X	R	A	N	V	G	K	L	L	K	G	I	D	R	Y	N	P	E	N	L	A	T	L	E	R	Y	V	E	T	Q	A	K	E	N	A	Y	D	L	E	A	N	L	A	V	L	K	L	Y	Q	F	N	P	A	F	F	Q	T	T	V	T	A	Q	I	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	G	G	G	G		G	G	G															T																	S	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	A	L	T	N	L	P	H	T	D	F	T	L	C	K	C	X	I	D	Q	A	H	Q	E	E	R	P	I	R	Q	I	L	Y	L	G	D	L	L	E	T	C	H	F	Q	A	F	W	Q	A	L	D	E	N	X	D	L	L	E	G	I	T	G	F	E	D	S	V	R	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	S	T								T	S						T	S	T	T													T	T									S		T	T						T	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	C	H	V	V	G	I	T	Y	Q	H	I	D	R	W	L	L	A	E	X	L	G	D	L	S	D	S	Q	L	K	V	W	X	S	K	Y	G	W	S	A	D	E	Q	I	F	I	C	S	Q	E	E	S	I	K	P	K	N	I	V	E	K	I	D	F	D	S	V	S	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S											T	T	S														T																T	S				S	S
	.	.	.
Sequence	X	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)