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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c1rutX_ | PDB header: protein binding | Chain: X: PDB Molecule: fusion protein of lmo4 protein and lim domain- | PDBTitle: complex of lmo4 lim domains 1 and 2 with the ldb1 lid domain |
Added to library: Tue Mar 16 13:53:08 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | S | W | K | R | C | A | G | C | G | G | K | I | A | D | R | F | L | L | Y | A | M | D | S | Y | W | H | S | R | C | L | K | C | S | S | C | Q | A | Q | L | G | D | I | G | T | S | S | Y | T | K | S | G | M | I | L | C | R | N | D | Y | I | R | L | F | G | N | S | G | A | C | S |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | B | T | T | T | B | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | G | G | G | B | T | T | T | B | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | A | C | G | Q | S | I | P | A | S | E | L | V | M | R | A | Q | G | N | V | Y | H | L | K | C | F | T | C | S | T | C | R | N | R | L | V | P | G | D | R | F | H | Y | I | N | G | S | L | F | C | E | H | D | R | P | T | A | L | I | G | D | V | M | V | V | G | E | P | T | L | M |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | G | G | G | B | T | T | T | B | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | G | G | G | T | T | T | ![]() | ![]() | ![]() | ![]() | T |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |||
Sequence | G | G | E | F | G | D | E | D | E | R | L | I | T | R | L | E | N | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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