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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1r5sA_

Fold library idPDB HeaderMoleculeTitle
c1r5sA_PDB header: membrane proteinChain: A: PDB Molecule: gap junction alpha-1 protein;PDBTitle: connexin 43 carboxyl terminal domain


Added to library: Wed Jan 9 16:32:33 2013
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence GPLGSPSKDCGSPKYAYFNGCSSPTAPLSPMSPPGYKLVTGDRNNSSCRNYNKQASEQNWANYSAEQNRM
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Known secondary structure (DSSP)


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 .........80.........90.........100.........110.........120.........130..
Sequence GQAGSTISNSHAQPFDFPDDNQNAKKVAAGHELQPLAIVDQRPSSRASSRASSRPRPDDLEI
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Known secondary structure (DSSP) T


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Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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