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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1r5mA_

Fold library idPDB HeaderMoleculeTitle
c1r5mA_PDB header: transcriptionChain: A: PDB Molecule: sir4-interacting protein sif2;PDBTitle: crystal structure of the c-terminal wd40 domain of sif2


Added to library: Tue Mar 16 12:53:53 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETYWKLTIIAELRHPFALSTNQVTCLA
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Known secondary structure (DSSP)




S

S
SS
TTTBT








B
 .........80.........90.........100.........110.........120.........130.........140
Sequence WSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ
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TTSSTTS
TTS




S

TTSSTT

TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence HFELKGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGT
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BS

TT
GGG
TT
SS
S


SS
TTTTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQ
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SSSBS
S


SS
TTTTTSTTTT
TT


T
 .........290.........300.........310.........320.........330.........340.........350
Sequence DGQKYAVAFMDGQVNVYDLKKLNSPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP
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Known secondary structure (DSSP) TSSTTS







TT




TTSSSSS



 .
Sequence G
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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