Fold library entry viewer: c1qxpB_

Added to library: Tue Mar 16 14:41:28 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	G	I	A	M	K	L	A	K	D	R	E	A	A	E	G	L	G	S	H	E	R	A	I	K	Y	L	N	Q	D	Y	E	T	L	R	N	E	C	L	E	A	G	A	L	F	Q	D	P	A	F	P	P	V	S	H	S	L	G	F	K	E	L	G	P	N	S	S	K	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	T	B	T	T	B				G	G	G														T	S					S	S	S		S	S	S	T	T	T		S	S	S	S	S	S	S		S	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	I	K	W	K	R	P	T	E	L	L	S	N	P	Q	F	I	V	D	G	A	T	R	T	D	I	C	Q	G	A	L	G	D	S	W	L	L	A	A	I	A	S	L	T	L	N	E	T	I	L	H	R	V	V	P	Y	G	Q	S	F	Q	E	G	Y	A	G	I	F	H	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T						G	G	G	T		S	S			S						S								T	T	S		S																	T	T	T	S		S	S			S	S	S	S		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	L	W	Q	F	G	E	W	V	D	V	V	V	D	D	L	L	P	T	K	D	G	K	L	V	F	V	H	S	A	Q	G	N	E	F	W	S	A	L	L	E	K	A	Y	A	K	V	N	G	S	Y	E	A	L	S	G	G	C	T	S	E	A	F	E	D	F	T	G	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T															T	T				S	S			S	S	S	S															T	S	S	T	T	T	T	S	S			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	E	W	Y	D	L	Q	K	A	P	S	D	L	Y	Q	I	I	L	K	A	L	E	R	G	S	L	L	G	C	S	I	N	K	N	L	V	G	H	A	Y	S	V	T	D	A	K	Q	V	T	Y	Q	G	Q	R	V	N	L	I	R	M	R	N	P	W	G	E	V	E	W	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G			T	T											T	T																											T	T											T	T						S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	P	W	S	E	W	N	D	P	Y	E	R	E	Q	L	R	V	K	M	E	D	G	E	F	W	M	S	F	R	D	F	I	R	E	F	T	K	L	E	I	C	N	L	T	P	D	A	L	K	S	R	R	N	W	N	T	T	F	Y	E	G	T	W	R	R	G	S	T	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S											S	T	T		T	T			T	T						S	T	T	S	S	S											T	T	S	S																		T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	C	R	N	Y	P	A	T	F	W	V	N	P	Q	F	K	I	R	L	E	E	V	D	D	A	D	D	Y	D	S	R	E	S	G	C	S	F	L	L	A	L	M	Q	K	H	R	F	G	R	D	M	E	T	I	G	F	A	V	Y	Q	V	P	R	E	L	A	G	P	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		T	T	T	G	G	G	S											S	S		S	S			S	S																																S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	K	R	D	F	F	L	A	N	A	S	R	A	Q	S	E	H	F	I	N	L	R	E	V	S	N	R	I	R	L	P	P	G	E	Y	I	V	V	P	S	T	F	E	P	N	K	E	G	D	F	L	L	R	F	F	S	E	K	K	A	G	T	Q	E	L	D	D	Q	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S				S				S	S				S	S										S										S	S	T	T												S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	N	L	P	D	E	K	V	K	T	L	F	I	S	V	K	E	L	Q	T	I	L	N	R	T	N	G	F	S	L	E	S	C	R	S	M	V	N	L	M	D	L	G	L	V	E	F	N	I	L	W	N	R	I	R	N	Y	L	T	I	F	R	K	F	D	L	D	K	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S																					S																	S	S																	G	G	G		S	S	S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	M	S	A	Y	E	M	R	M	A	I	E	A	A	G	F	K	L	P	C	Q	L	H	Q	V	I	V	A	R	F	A	D	D	E	L	I	I	D	F	D	N	F	V	R	C	L	V	R	L	E	I	L	F	K	I	F	K	Q	L	D	P	E	N	T	G	T	I	Q	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B											T	T	T	T																S		S	S	S			B																							T	T			S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	I	S	W	L	S	F	S	V	L	M	H	Y	S	N	N	E	S	E	E	R	Q	F	R	K	L	F	V	Q	L	M	E	V	S	A	T	E	L	M	F	G	I	D	T	C	R	S	M	V	A	V	M	D	S	D	T	T	G	K	L	G	F	E	E	F	K	Y	L	W	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T	T	T			S	S							S	T	T	T				S					T	T						S	S	S	S					S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	N	I	K	K	W	Q	G	I	R	F	E	T	D	R	S	G	P	G	A	F	E	A	A	G	F	H	L	N	Q	H	I	Y	S	M	I	I	R	S	D	E	T	G	N	M	D	F	D	N	F	I	S	C	L	V	R	L	D	A	M	F	R	A	F	R	S	L	D	K	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T								S	G	G	G	T	T					T	T	T	T	S	S	T	T				S	S	S			S	S	T	T	T	T																T	T	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.
Sequence	T	G	Q	I	Q	V	N	I	Q	E	W	L	Q	L	T	M	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S										T

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PDB structure

FASTA sequence

Hidden Markov model

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