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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1qvcA_

Fold library idPDB HeaderMoleculeTitle
c1qvcA_PDB header: dna binding proteinChain: A: PDB Molecule: single stranded dna binding protein monomer;PDBTitle: crystal structure analysis of single stranded dna binding protein2 (ssb) from e.coli


Added to library: Wed Jan 9 18:24:16 2013
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence ASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEY
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Known secondary structure (DSSP)






SS



SSS





S

SSSS




T
 .........80.........90.........100.........110.........120.........130.........140
Sequence LRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQMLGGRQGGGAPAGGNIGGGQPQGGWGQPQQ
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Known secondary structure (DSSP)

TT

SSSS

TT




S


SSSSS


SS
SSTT
SSSS
S
 .....
Sequence PQGGN
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Known secondary structure (DSSP) S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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