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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1qo3A_

Fold library idPDB HeaderMoleculeTitle
c1qo3A_PDB header: receptor/immune systemChain: A: PDB Molecule: mhc class i h-2dd heavy chain;PDBTitle: complex between nk cell receptor ly49a and its mhc class i2 ligand h-2dd


Added to library: Tue Mar 16 12:12:13 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYWERETRRAKGNE
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Known secondary structure (DSSP)


TTSSS
TTS
SSS



SGGGTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QSFRVDLRTALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQ
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Known secondary structure (DSSP) TT

TTS


TTS
TT
TTSS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ITRRKWEQAGAAERDRAYLEGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTLRCWALGFYPA
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Known secondary structure (DSSP) TTTT

B


TTSSBSS
 .........220.........230.........240.........250.........260.........270....
Sequence DITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVPLGKEQKYTCHVEHEGLPEPLTLRWG
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Known secondary structure (DSSP)

SSS


SS




TTS

TT
GGG
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SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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