Fold library entry viewer: c1qhoA_

Added to library: Tue Mar 16 12:15:03 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	S	S	A	S	V	K	G	D	V	I	Y	Q	I	I	I	D	R	F	Y	D	G	D	T	T	N	N	N	P	A	K	S	Y	G	L	Y	D	P	T	K	S	K	W	K	M	Y	W	G	G	D	L	E	G	V	R	Q	K	L	P	Y	L	K	Q	L	G	V	T	T	I	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S			T	T								G	G	G	T			S		G	G	G	S	S		G	G	G	T	T		B		T	T	S		S	T	T	S	B											T								T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	S	P	V	L	D	N	L	D	T	L	A	G	T	D	N	T	G	Y	H	G	Y	W	T	R	D	F	K	Q	I	E	E	H	F	G	N	W	T	T	F	D	T	L	V	N	D	A	H	Q	N	G	I	K	V	I	V	D	F	V	P	N	H	S	T	P	F	K	A	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S		S	S	T	T				T	T	S		S									T	T	T																T	T									T	T						B	T	T	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	T	F	A	E	G	G	A	L	Y	N	N	G	T	Y	M	G	N	Y	F	D	D	A	T	K	G	Y	F	H	H	N	G	D	I	S	N	W	D	D	R	Y	E	A	Q	W	K	N	F	T	D	P	A	G	F	S	L	A	D	L	S	Q	E	N	G	T	I	A	Q	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	T	T	T	T					T	T						S	S	S		T	T	T			B			S		B		S		T	T								S	B				T	T	T						B		T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	D	A	A	V	Q	L	V	A	H	G	A	D	G	L	R	I	D	A	V	K	H	F	N	S	G	F	S	K	S	L	A	D	K	L	Y	Q	K	K	D	I	F	L	V	G	E	W	Y	G	D	D	P	G	T	A	N	H	L	E	K	V	R	Y	A	N	N	S	G	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T							T	T	G	G	G	S																													T	T	S	T	T											S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	L	D	F	D	L	N	T	V	I	R	N	V	F	G	T	F	T	Q	T	M	Y	D	L	N	N	M	V	N	Q	T	G	N	E	Y	K	Y	K	E	N	L	I	T	F	I	D	N	H	D	M	S	R	F	L	S	V	N	S	N	K	A	N	L	H	Q	A	L	A	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B													T	S		S	S																	T	T	G	G	G					S			T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	T	S	R	G	T	P	S	I	Y	Y	G	T	E	Q	Y	M	A	G	G	N	D	P	Y	N	R	G	M	M	P	A	F	D	T	T	T	T	A	F	K	E	V	S	T	L	A	G	L	R	R	N	N	A	A	I	Q	Y	G	T	T	T	Q	R	W	I	N	N	D	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S						T	T	G	G	G	T					S	T	T	T	T									T	T	S																															S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	Y	E	R	K	F	F	N	D	V	V	L	V	A	I	N	R	N	T	Q	S	S	Y	S	I	S	G	L	Q	T	A	L	P	N	G	S	Y	A	D	Y	L	S	G	L	L	G	G	N	G	I	S	V	S	N	G	S	V	A	S	F	T	L	A	P	G	A	V	S	V	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T											T	T							S		B			S		S						T	T	T	T	T	T	S								T	T									T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	Y	S	T	S	A	S	A	P	Q	I	G	S	V	A	P	N	M	G	I	P	G	N	V	V	T	I	D	G	K	G	F	G	T	T	Q	G	T	V	T	F	G	G	V	T	A	T	V	K	S	W	T	S	N	R	I	E	V	Y	V	P	N	M	A	A	G	L	T	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S								S	S				T	T												S	S							T	T										S	S								S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	V	T	A	G	G	V	S	S	N	L	Y	S	Y	N	I	L	S	G	T	Q	T	S	V	V	F	T	V	K	S	A	P	P	T	N	L	G	D	K	I	Y	L	T	G	N	I	P	E	L	G	N	W	S	T	D	T	S	G	A	V	N	N	A	Q	G	P	L	L	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T												S	S	S										S						T	T								S	S	G	G	G	T	T	T					S	S		S	S			B				B		T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
Sequence	N	Y	P	D	W	F	Y	V	F	S	V	P	A	G	K	T	I	Q	F	K	F	F	I	K	R	A	D	G	T	I	Q	W	E	N	G	S	N	H	V	A	T	T	P	T	G	A	T	G	N	I	T	V	T	W	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S									T	T												T	T	S							S	S								S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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