Fold library entry viewer: c1qhaA_

Added to library: Tue Mar 16 12:01:09 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	E	L	K	D	D	Q	V	K	K	I	D	K	Y	L	Y	A	M	R	L	S	D	E	T	L	I	D	I	M	T	R	F	R	K	E	M	K	N	G	L	S	R	D	F	N	P	T	A	T	V	K	M	L	P	T	F	V	R	S	I	P	D	G	S	E	K	G	D	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	G	G	G																							S	T	T	T	S	S	S		S	S									S	S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	L	D	L	G	G	S	S	F	R	I	L	R	V	Q	V	N	H	E	K	N	Q	N	V	H	M	E	S	E	V	Y	D	T	P	E	N	I	V	H	G	S	G	S	Q	L	F	D	H	V	A	E	C	L	G	D	F	M	E	K	R	K	I	K	D	K	K	L	P	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	S	B									G	G	G	S										B								S	S	B																			T	T		T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	T	F	S	F	P	C	Q	Q	S	K	I	D	E	A	I	L	I	T	W	T	K	R	F	K	A	S	G	V	E	G	A	D	V	V	K	L	L	N	K	A	I	K	K	R	G	D	Y	D	A	N	I	V	A	V	V	N	D	T	V	G	T	M	M	T	C	G	Y	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S					S	S	T	T									T	T				B	T		T	T	S	B														S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	H	C	E	V	G	L	I	I	G	T	G	T	N	A	C	Y	M	E	E	L	R	H	I	D	L	V	E	G	D	E	G	R	M	C	I	N	T	E	W	G	A	F	G	D	D	G	S	L	E	D	I	R	T	E	F	D	R	E	I	D	R	G	S	L	N	P	G	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								S	S	S									G	G	G		T	T	S	S			S	S								G	G	G	T	T	T	T	T	T	T	T	T	T												S	S	S	T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	F	E	K	M	V	S	G	M	Y	L	G	E	L	V	R	L	I	L	V	K	M	A	K	E	G	L	L	F	E	G	R	I	T	P	E	L	L	T	R	G	K	F	N	T	S	D	V	S	A	I	E	K	N	K	E	G	L	H	N	A	K	E	I	L	T	R	L	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T					S																			T	S	S	G	G	G				T	T	T	T	S	T	T	S	S									T		T	T	T												T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	P	S	D	D	D	C	V	S	V	Q	H	V	C	T	I	V	S	F	R	S	A	N	L	V	A	A	T	L	G	A	I	L	N	R	L	R	D	N	K	G	T	P	R	L	R	T	T	V	G	V	D	G	S	L	Y	K	T	H	P	Q	Y	S	R	R	F	H	K	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																									T		S	S																S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	R	L	V	P	D	S	D	V	R	F	L	L	S	E	S	G	S	G	K	G	A	A	M	V	T	A	V	A	Y	R	L	A	E	Q	H	R	Q	I	E	E	T	L	A	H	F	H	L	T	K	D	M	L	L	E	V	K	K	R	M	R	A	E	M	E	L	G	L	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T									T	T		S																										G	G	G																							S	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	T	H	N	N	A	V	V	K	M	L	P	S	F	V	R	R	T	P	D	G	T	E	N	G	D	F	L	A	L	D	L	G	G	T	N	F	R	V	L	L	V	K	I	R	S	G	K	K	R	T	V	E	M	H	N	K	I	Y	A	I	P	I	E	I	M	Q	G	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S	S			S									S				S												S	S	S												S	S	S																		T	S	B	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	E	L	F	D	H	I	V	S	C	I	S	D	F	L	D	Y	M	G	I	K	G	P	R	M	P	L	G	F	T	F	S	F	P	C	Q	Q	T	S	L	D	A	G	I	L	I	T	W	T	K	G	F	K	A	T	D	C	V	G	H	D	V	V	T	L	L	R	D	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T			S	S										S							T	T									T	T				B	T		T	T	S	B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	R	R	E	E	F	D	L	D	V	V	A	V	V	N	D	T	V	G	T	M	M	T	C	A	Y	E	E	P	T	C	E	V	G	L	I	V	G	T	G	S	N	A	C	Y	M	E	E	M	K	N	V	E	M	V	E	G	D	Q	G	Q	M	C	I	N	M	E	W	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S																					T	T		T	T								S	S	S									G	G	G		T	T	S	S			S	S								G	G	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	F	G	D	N	G	C	L	D	D	I	R	T	H	Y	D	R	L	V	N	E	Y	S	L	N	A	G	K	Q	R	Y	E	K	M	I	S	G	M	Y	L	G	E	I	V	R	N	I	L	I	D	F	T	K	K	G	F	L	F	R	G	Q	I	S	E	T	L	K	T	R	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S	S	T	T	T	T	T											T	S	T	T	T	T	S								S	T	T	T															T	T	S	S	G	G	G				T	T	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	F	E	T	K	F	L	S	Q	I	E	S	D	R	L	A	L	L	Q	V	R	A	I	L	Q	Q	L	G	L	N	S	T	C	D	D	S	I	L	V	K	T	V	C	G	V	V	S	R	R	A	A	Q	L	C	G	A	G	M	A	A	V	V	D	K	I	R	E	N	R	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									T		T	T														T																																									T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.
Sequence	D	R	L	N	V	T	V	G	V	D	G	T	L	Y	K	L	H	P	H	F	S	R	I	M	H	Q	T	V	K	E	L	S	P	K	C	N	V	S	F	L	L	S	E	D	G	S	G	K	G	A	A	L	I	T	A	V	G	V	R	L	R	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																T	T														T	T									T	T		S														S	S

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PDB structure

FASTA sequence

Hidden Markov model

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