Fold library entry viewer: c1qfmA_

Added to library: Tue Mar 16 14:26:00 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	L	S	F	Q	Y	P	D	V	Y	R	D	E	T	A	I	Q	D	Y	H	G	H	K	V	D	P	Y	A	W	L	E	D	P	D	S	E	Q	T	K	A	F	V	E	A	Q	N	K	I	T	V	P	F	L	E	Q	P	I	R	G	L	Y	K	E	R	M	T	E	L	Y	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S									T	T						T	T					T	T	G	G	G	G		T	T	S																																		T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	P	K	Y	S	C	H	F	K	K	G	K	R	Y	F	Y	F	Y	N	T	G	L	Q	N	Q	R	V	L	Y	V	Q	D	S	L	E	G	E	A	R	V	F	L	D	P	N	I	L	S	D	D	G	T	V	A	L	R	G	Y	A	F	S	E	D	G	E	Y	F	A	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										T	T									S	S		S	S							S	S	S	S	S								G	G	G	G		S	S	S											T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	S	A	S	G	S	D	W	V	T	I	K	F	M	K	V	D	G	A	K	E	L	P	D	V	L	E	R	V	K	F	S	M	A	W	T	H	D	G	K	G	M	F	Y	N	A	Y	P	Q	Q	D	G	K	S	D	G	T	E	T	S	T	N	L	H	Q	K	L	Y	Y	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S									T	T	T	T																		T	T	S	S											S	S			S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	L	G	T	D	Q	S	E	D	I	L	C	A	E	F	P	D	E	P	K	W	M	G	G	A	E	L	S	D	D	G	R	Y	V	L	L	S	I	R	E	G	D	P	V	N	R	L	W	Y	C	D	L	Q	Q	E	S	N	G	I	T	G	I	L	K	W	V	K	L	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S		G	G	G								T	T		T	T									T	T	S																					G	G	G	S	S	S	S	S		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	F	E	G	E	Y	D	Y	V	T	N	E	G	T	V	F	T	F	K	T	N	R	H	S	P	N	Y	R	L	I	N	I	D	F	T	D	P	E	E	S	K	W	K	V	L	V	P	E	H	E	K	D	V	L	E	W	V	A	C	V	R	S	N	F	L	V	L	C	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S									T	T								T	T		T	T								T	T	B			G	G	G									S	S										T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	H	D	V	K	N	T	L	Q	L	H	D	L	A	T	G	A	L	L	K	I	F	P	L	E	V	G	S	V	V	G	Y	S	G	Q	K	K	D	T	E	I	F	Y	Q	F	T	S	F	L	S	P	G	I	I	Y	H	C	D	L	T	K	E	E	L	E	P	R	V	F	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T									T	T	T											S	S									T	T		S									S	S										T	T	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	T	V	K	G	I	D	A	S	D	Y	Q	T	V	Q	I	F	Y	P	S	K	D	G	T	K	I	P	M	F	I	V	H	K	K	G	I	K	L	D	G	S	H	P	A	F	L	Y	G	Y	G	G	F	N	I	S	I	T	P	N	Y	S	V	S	R	L	I	F	V	R	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T			G	G	G											T	T	S											T	T				S	S		S										T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	M	G	G	V	L	A	V	A	N	I	R	G	G	G	E	Y	G	E	T	W	H	K	G	G	I	L	A	N	K	Q	N	C	F	D	D	F	Q	C	A	A	E	Y	L	I	K	E	G	Y	T	S	P	K	R	L	T	I	N	G	G	S	N	G	G	L	L	V	A	T	C	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S	S	T	T							T	T	S	G	G	G	T																	T	T	S			G	G	G							T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	Q	R	P	D	L	F	G	C	V	I	A	Q	V	G	V	M	D	M	L	K	F	H	K	Y	T	I	G	H	A	W	T	T	D	Y	G	S	D	S	K	Q	H	F	E	W	L	I	K	Y	S	P	L	H	N	V	K	L	P	E	A	D	D	I	Q	Y	P	S	M	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G		S						S					T	T	T	G	G	G	S	T	T	G	G	G	G								S												G	G	G						S	S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	T	A	D	H	D	D	R	V	V	P	L	H	S	L	K	F	I	A	T	L	Q	Y	I	V	G	R	S	R	K	Q	N	N	P	L	L	I	H	V	D	T	K	A	G	H	G	A	G	K	P	T	A	K	V	I	E	E	V	S	D	M	F	A	F	I	A	R	C	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T			S	S		T														T	T	T	S	T	T			S								S	S			S	S	T	T																						T
	.	.	.	.	.
Sequence	I	D	W	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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