Fold library entry viewer: c1q5cA_

Added to library: Tue Mar 16 14:38:21 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	W	V	I	P	P	I	K	V	S	E	N	E	R	G	P	F	P	K	R	L	V	Q	I	K	S	N	K	D	R	F	N	K	V	Y	Y	S	I	T	G	Q	G	A	D	N	P	P	Q	G	V	F	R	I	E	W	E	T	G	W	M	L	V	T	R	P	L	D	R	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B				B			B						T	T	T	T			B	B					B	T	B	S			B	T	T	B		B		S	T					T	B		S		B	T	B	T	T		B	T	T	T			T	B	B			T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	D	K	Y	V	L	S	S	H	A	V	S	E	N	G	S	P	V	E	E	P	M	E	I	T	I	N	V	I	D	Q	N	D	N	R	P	K	F	T	Q	D	V	F	R	G	S	V	R	E	G	V	Q	P	G	T	Q	V	M	A	V	S	A	T	D	E	D	D	N	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	S	S						B	B	B								S	T	T			B	B			B		B	B			S			B					T			B							T	T	T								B			S	S	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	L	N	G	V	L	S	Y	S	I	L	K	Q	D	P	E	E	P	I	P	N	L	F	T	I	N	R	E	T	G	V	I	S	L	I	G	T	G	L	D	R	E	K	F	P	E	Y	T	L	T	V	Q	A	T	D	L	E	G	A	G	L	S	V	E	G	K	A	I	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	T	T	T	T	B	B										S	B	T			B								T	B		B	T	T	T		B		T	T	S	B	S	B				B	B	B					T	B	T		B	B				B		B	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	T	D	A	N	D	N	A	P	I	F	D	P	K	T	Y	T	A	L	V	P	E	N	E	I	G	F	E	V	Q	R	L	S	V	T	D	L	D	M	P	G	T	P	A	W	Q	A	V	Y	K	I	R	V	N	E	G	G	F	F	N	I	T	T	D	P	E	S	N	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	B	S				B	T	T	B	S										B										T	B	T	T		B	B	S	B	T	T	T	B					T	T	T	T	T	S								T	T	S	B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	L	T	T	A	K	G	L	D	F	E	L	R	K	Q	Y	V	L	Q	I	T	V	E	N	A	E	P	F	S	V	P	L	P	T	S	T	A	T	V	T	V	T	V	E	D	V	N	E	A	P	F	F	V	P	A	V	S	R	V	D	V	S	E	D	L	S	R	G	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S			B	B		S	T	T	T	S	B	B	B	S				T	T	T	T	T	T							B					B						S		B												T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	I	S	L	V	A	Q	D	P	D	K	Q	Q	I	Q	K	L	S	Y	F	I	G	N	D	P	A	R	W	L	T	V	N	K	D	N	G	I	V	T	G	N	G	N	L	D	R	E	S	E	Y	V	K	N	N	T	Y	T	V	I	M	L	V	T	D	D	G	V	S	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												B							B		B				B	T	T						B	B	T	T						B			B	T	T	T	S	S	B		S	B							B					S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	G	T	G	T	L	I	L	H	V	L	D	V	N	D	N	G	P	V	P	S	P	R	V	F	T	M	C	D	Q	N	P	E	P	Q	V	L	T	I	S	D	A	D	I	P	P	N	T	Y	P	Y	K	V	S	L	S	H	G	S	D	L	T	W	K	A	E	L	D	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B										B					S	B	B										B	S	S	B		B									B	S		S	S	T	B		S		B	B				S		S	T	T	T							S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Sequence	G	T	S	M	L	L	S	P	T	Q	Q	L	K	K	G	D	Y	S	I	Y	V	L	L	S	D	A	Q	N	N	P	Q	L	T	V	V	N	A	T	V	C	S	C	E	G	K	A	I	K	C	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B							B	B				S	B										S	B	B		B	B	B										S		S	B	S	B	B		B

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PDB structure

FASTA sequence

Hidden Markov model

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