PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1q11A_

Fold library id	PDB Header	Molecule	Title
c1q11A_	PDB header: ligase	Chain: A: PDB Molecule: tyrosyl-trna synthetase;	PDBTitle: crystal structure of an active fragment of human tyrosyl-2 trna synthetase with tyrosinol

Links to external resources
Added to library: Tue Mar 16 12:48:46 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A P S P E E K L H L I T R N L Q E V L G E E K L K E I L K E R E L K I Y W G T A T T G K P H V A Y F V P M S K I A D F L K A G C E V T I L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
S
S
S
B G G G T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A D L H A Y L D N M K A P W E L L E L R V S Y Y E N V I K A M L E S I G V P L E K L K F I K G T D Y Q L S K E Y T L D V Y R L S S V V T Q H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
T T
T T
G G G T T T S T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D S K K A G A E V V K Q V E H P L L S G L L Y P G L Q A L D E E Y L K V D A Q F G G I D Q R K I F T F A E K Y L P A L G Y S K R V H L M N P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S
S S
T T
S G G G T G G G T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence M V P G L T G K I D L L D R K E D V K K K L K K A F C E P G N V E N N G V L S F I K H V L F P L K S E F V I L R D E K W G G N K T Y T A Y V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
B T T
T S S S
T T
S S
T S S
G G G T
S S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . .

Sequence D L E K D F A A E V V H P G D L K N S V E V A L N K L L D P I R E K F N T P A L K K L A S A A Y P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	P	S	P	E	E	K	L	H	L	I	T	R	N	L	Q	E	V	L	G	E	E	K	L	K	E	I	L	K	E	R	E	L	K	I	Y	W	G	T	A	T	T	G	K	P	H	V	A	Y	F	V	P	M	S	K	I	A	D	F	L	K	A	G	C	E	V	T	I	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T		S															S										S		S			B	G	G	G													T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	D	L	H	A	Y	L	D	N	M	K	A	P	W	E	L	L	E	L	R	V	S	Y	Y	E	N	V	I	K	A	M	L	E	S	I	G	V	P	L	E	K	L	K	F	I	K	G	T	D	Y	Q	L	S	K	E	Y	T	L	D	V	Y	R	L	S	S	V	V	T	Q	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		S	S																							T	T				T	T						G	G	G	T	T	T	S												T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	S	K	K	A	G	A	E	V	V	K	Q	V	E	H	P	L	L	S	G	L	L	Y	P	G	L	Q	A	L	D	E	E	Y	L	K	V	D	A	Q	F	G	G	I	D	Q	R	K	I	F	T	F	A	E	K	Y	L	P	A	L	G	Y	S	K	R	V	H	L	M	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T	S				S	S																			T	T		S						G	G	G											T	G	G	G	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	M	V	P	G	L	T	G	K	I	D	L	L	D	R	K	E	D	V	K	K	K	L	K	K	A	F	C	E	P	G	N	V	E	N	N	G	V	L	S	F	I	K	H	V	L	F	P	L	K	S	E	F	V	I	L	R	D	E	K	W	G	G	N	K	T	Y	T	A	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T				B	T	T											T	S	S	S			T	T			S	S										T						S	S							G	G	G	T						S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Sequence	D	L	E	K	D	F	A	A	E	V	V	H	P	G	D	L	K	N	S	V	E	V	A	L	N	K	L	L	D	P	I	R	E	K	F	N	T	P	A	L	K	K	L	A	S	A	A	Y	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		S																								T		S