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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1pjmB_

Fold library idPDB HeaderMoleculeTitle
c1pjmB_PDB header: protein transportChain: B: PDB Molecule: importin alpha-2 subunit;PDBTitle: mouse importin alpha-bipartite nls from human2 retinoblastoma protein complex


Added to library: Tue Mar 16 11:58:21 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QGTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFES
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Known secondary structure (DSSP)
TTSS

SS
TTSSS


TT
T
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLL
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Known secondary structure (DSSP) TS
TTTT
S
T
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTD
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Known secondary structure (DSSP) T
SS
GGGS
S


SS


TT
S
TS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTN
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Known secondary structure (DSSP) S
TTT
T
S
TTS
TTGGGGTT
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence IQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCG
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Known secondary structure (DSSP) TTS
TT
SS
S
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence IIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLN
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Known secondary structure (DSSP)
TT
S
TTTTTTSTGGGG
SS
 .......
Sequence LIEKYFS
Predicted secondary structure

SS confidence






Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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