Fold library entry viewer: c1pj6A_

Added to library: Tue Mar 16 12:43:42 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	T	P	R	I	V	I	I	G	A	G	I	V	G	T	N	L	A	D	E	L	V	T	R	G	W	N	N	I	T	V	L	D	Q	G	P	L	N	M	P	G	G	S	T	S	H	A	P	G	L	V	F	Q	T	N	P	S	K	T	M	A	S	F	A	K	Y	T	V	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S													T	T									S	S		T	T				S	G	G	G	G										S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	L	S	L	T	E	D	G	V	S	C	F	N	Q	V	G	G	L	E	V	A	T	T	E	T	R	L	A	D	L	K	R	K	L	G	Y	A	A	A	W	G	I	E	G	R	L	L	S	P	A	E	C	Q	E	L	Y	P	L	L	D	G	E	N	I	L	G	G	L	H	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T			S											S	S																		T																T	T	S		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	S	D	G	L	A	S	A	A	R	A	V	Q	L	L	I	K	R	T	E	S	A	G	V	T	Y	R	G	S	T	T	V	T	G	I	E	Q	S	G	G	R	V	T	G	V	Q	T	A	D	G	V	I	P	A	D	I	V	V	S	C	A	G	F	W	G	A	K	I	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																				T	T						S										T	T								T	T						S							G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	M	I	G	M	A	V	P	L	L	P	L	A	H	Q	Y	V	K	T	T	P	V	P	A	Q	Q	G	R	N	D	Q	P	N	G	A	R	L	P	I	L	R	H	Q	D	Q	D	L	Y	Y	R	E	H	G	D	R	Y	G	I	G	S	Y	A	H	R	P	M	P	V	D	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																S			G	G	G	T	T	T	S		T	T	T				S						G	G	G	T							T	T									S				B			G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	L	G	A	Y	A	P	E	T	V	S	E	H	H	M	P	S	R	L	D	F	T	L	E	D	F	L	P	A	W	E	A	T	K	Q	L	L	P	A	L	A	D	S	E	I	E	D	G	F	N	G	I	F	S	F	T	P	D	G	G	P	L	L	G	E	S	K	E	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S					G	G	G		B	T	T	B	S	T	T																					G	G	G	G	G	S														T	T	S								S	S	S	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	F	Y	V	A	E	A	V	W	V	T	H	S	A	G	V	A	K	A	M	A	E	L	L	T	T	G	R	S	E	T	D	L	G	E	C	D	I	T	R	F	E	D	V	Q	L	T	P	E	Y	V	S	E	T	S	Q	Q	N	F	V	E	I	Y	D	V	L	H	P	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T						S			G	G	G															S	S		S	S			T	T	T	B	G	G	G	S		G	G	G	S	S														T	T	T					T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	R	L	S	P	R	N	L	R	V	S	P	F	H	A	R	H	K	E	L	G	A	F	F	L	E	A	G	G	W	E	R	P	Y	W	F	E	A	N	A	A	L	L	K	E	M	P	A	E	W	L	P	P	A	R	D	A	W	S	G	M	F	S	S	P	I	A	A	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S			S	B			T	T							T	T							T	T								G	G	G	G	G	G	G	G	G	S		G	G	G							T	T	T	T	T	T			T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	W	K	T	R	T	A	V	A	M	Y	D	M	T	P	L	K	R	L	E	V	S	G	P	G	A	L	K	L	L	Q	E	L	T	T	A	D	L	A	K	K	P	G	A	V	T	Y	T	L	L	L	D	H	A	G	G	V	R	S	D	I	T	V	A	R	L	S	E	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S							T	T	S							S	T	T									B	S	S						T	T	B									T	T	S													T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	Q	L	G	A	N	G	N	I	D	T	A	Y	F	E	R	A	A	R	H	Q	T	Q	S	G	S	A	T	D	W	V	Q	V	R	D	T	T	G	G	T	C	C	I	G	L	W	G	P	L	A	R	D	L	V	S	K	V	S	D	D	D	F	T	N	D	G	L	K	Y	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S																		S		T	T									G	G	G								S	T	T						T	T	S			S			S	T	T	T	S		T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	R	A	K	N	V	V	I	G	G	I	P	V	T	A	M	R	L	S	Y	V	G	E	L	G	W	E	L	Y	T	S	A	D	N	G	Q	R	L	W	D	A	L	W	Q	A	G	Q	P	F	G	V	I	A	A	G	R	A	A	F	S	S	L	R	L	E	K	G	Y	R	S	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B							T	T										T	T	S	S	S																							G	G	G	T																T	T				B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	G	T	D	M	T	T	E	H	D	P	F	E	A	G	L	G	F	A	V	K	M	A	K	E	S	F	I	G	K	G	A	L	E	G	R	T	E	E	A	S	A	R	R	L	R	C	L	T	I	D	D	G	R	S	I	V	L	G	K	E	P	V	F	Y	K	E	Q	A	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	B		T	T	S		T	T	T	T	T		G	G	G			T	T	S	S			T	T	T	G	G	G	T	T			S	T	T		S									T	T	S						S							T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.
Sequence	Y	V	T	S	A	A	Y	G	Y	T	V	A	K	P	I	A	Y	S	Y	L	P	G	T	V	S	V	G	D	S	V	D	I	E	Y	F	G	R	R	I	T	A	T	V	T	E	D	P	L	Y	D	P	K	M	T	R	L	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	T										T	T	S		T	T								T	T										S		S	S		T	T		T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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