PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1pieA_

Fold library id	PDB Header	Molecule	Title
c1pieA_	PDB header: transferase	Chain: A: PDB Molecule: galactokinase;	PDBTitle: crystal structure of lactococcus lactis galactokinase2 complexed with galactose

Links to external resources
Added to library: Tue Mar 16 12:52:23 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T V L S A L T E K F A E V F G D T K E V E Y F F S P G R I N L I G E H T D Y N G G Y V F P A S I T I G T T G L A R L R E D K K V K L Y S E N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S
T T T T
S S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F P K L G V I E F D L D E V E K K D G E L W S N Y V K G M I V M L K G A G Y E I D K G F E L L I K G E I P T A S G L S S S A S L E L L V G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T
T T S
T T
T T T
S
S
T T S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V L D D L F N L N V P R L E L V Q L G Q K T E N D Y I G V N S G I L D Q F A I G F G E V K K A I E L D C N T L K Y E M V P V E L R D Y D I V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
S
B T T T T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence I M N T N K P R A L T E S K Y N E R F A E T R E A L K R M Q T R L D I Q S L G E L S N E E F D A N T D L I G D E T L I K R A R H A V Y E N N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S G G G
T G G G T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence R T K I A Q K A F V A G N L T K F G E L L N A S H A S L K D D Y E V T G L E L D T L A E T A Q K Q A G V L G A R M T G A G F G G C A I A L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T S
S T T
S S
S S S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . .

Sequence A H D N V S A F R K A V G Q V Y E E V V G Y P A S F Y V A Q I G S G S T K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G S S
B
S B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	V	L	S	A	L	T	E	K	F	A	E	V	F	G	D	T	K	E	V	E	Y	F	F	S	P	G	R	I	N	L	I	G	E	H	T	D	Y	N	G	G	Y	V	F	P	A	S	I	T	I	G	T	T	G	L	A	R	L	R	E	D	K	K	V	K	L	Y	S	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S				S																S		T	T	T	T																				S	S	S							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	P	K	L	G	V	I	E	F	D	L	D	E	V	E	K	K	D	G	E	L	W	S	N	Y	V	K	G	M	I	V	M	L	K	G	A	G	Y	E	I	D	K	G	F	E	L	L	I	K	G	E	I	P	T	A	S	G	L	S	S	S	A	S	L	E	L	L	V	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G							T	T		T	T	S			T	T		T														T	T					S										S		T	T	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	L	D	D	L	F	N	L	N	V	P	R	L	E	L	V	Q	L	G	Q	K	T	E	N	D	Y	I	G	V	N	S	G	I	L	D	Q	F	A	I	G	F	G	E	V	K	K	A	I	E	L	D	C	N	T	L	K	Y	E	M	V	P	V	E	L	R	D	Y	D	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T																			T	T						S										B	T	T							T	T	T											T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	M	N	T	N	K	P	R	A	L	T	E	S	K	Y	N	E	R	F	A	E	T	R	E	A	L	K	R	M	Q	T	R	L	D	I	Q	S	L	G	E	L	S	N	E	E	F	D	A	N	T	D	L	I	G	D	E	T	L	I	K	R	A	R	H	A	V	Y	E	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T																									S	S	G	G	G									T	G	G	G	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	T	K	I	A	Q	K	A	F	V	A	G	N	L	T	K	F	G	E	L	L	N	A	S	H	A	S	L	K	D	D	Y	E	V	T	G	L	E	L	D	T	L	A	E	T	A	Q	K	Q	A	G	V	L	G	A	R	M	T	G	A	G	F	G	G	C	A	I	A	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T																			T	S																	S	T	T								S	S		S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Sequence	A	H	D	N	V	S	A	F	R	K	A	V	G	Q	V	Y	E	E	V	V	G	Y	P	A	S	F	Y	V	A	Q	I	G	S	G	S	T	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G																	S	S									B				S	B