Fold library entry viewer: c1pi6A_

Added to library: Tue Mar 16 14:00:50 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	S	I	S	L	K	E	I	I	P	P	Q	P	S	T	Q	R	N	F	T	T	H	L	S	Y	D	P	T	T	N	A	I	A	Y	P	C	G	K	S	A	F	V	R	C	L	D	D	G	D	S	K	V	P	P	V	V	Q	F	T	G	H	G	S	S	V	V	T	T	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																B	T	T	B								T	T	T	T							T	T										S			S	S		S						T	T	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	S	P	I	K	G	S	Q	Y	L	C	S	G	D	E	S	G	K	V	I	V	W	G	W	T	F	D	K	E	S	N	S	V	E	V	N	V	K	S	E	F	Q	V	L	A	G	P	I	S	D	I	S	W	D	F	E	G	R	R	L	C	V	V	G	E	G	R	D	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	T	T									T	T	S											T	T	T	T														S	S									T	T	S										S	S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	V	F	I	S	W	D	S	G	N	S	L	G	E	V	S	G	H	S	Q	R	I	N	A	C	H	L	K	Q	S	R	P	M	R	S	M	T	V	G	D	D	G	S	V	V	F	Y	Q	G	P	P	F	K	F	S	A	S	D	R	T	H	H	K	Q	G	S	F	V	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S			B		B				S		S	S									S	S	S	S								B	T	T							T	T	T	B								S	S	S		T	T		B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	E	F	S	P	D	S	G	E	F	V	I	T	V	G	S	D	R	K	I	S	C	F	D	G	K	S	G	E	F	L	K	Y	I	E	D	D	Q	E	P	V	Q	G	G	I	F	A	L	S	W	L	D	S	Q	K	F	A	T	V	G	A	D	A	T	I	R	V	W	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	T	T									T	T								T	T	T										T	T					S								S	S	S	S							T	T	T							T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	T	S	K	C	V	Q	K	W	T	L	D	K	Q	Q	L	G	N	Q	Q	V	G	V	V	A	T	G	N	G	R	I	I	S	L	S	L	D	G	T	L	N	F	Y	E	L	G	H	D	E	V	L	K	T	I	S	G	H	N	K	G	I	T	A	L	T	V	N	P	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T										T	T	S	G	G	G										T	T							T	T	S							T	T												S	S							T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	G	S	Y	D	G	R	I	M	E	W	S	S	S	S	M	H	Q	D	H	S	N	L	I	V	S	L	D	N	S	K	A	Q	E	Y	S	S	I	S	W	D	D	T	L	K	V	N	G	I	T	K	H	E	F	G	S	Q	P	K	V	A	S	A	N	N	D	G	F	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S					T	T	T	T								S									S	T	T							T	T	S					T	T							S	S									S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	L	T	N	D	D	D	L	L	I	L	Q	S	F	T	G	D	I	I	K	S	V	R	L	N	S	P	G	S	A	V	S	L	S	Q	N	Y	V	A	V	G	L	E	E	G	N	T	I	Q	V	F	K	L	S	D	L	E	V	S	F	D	L	K	T	P	L	R	A	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S							T	T	T										S	S									S	S							T	G	G	G							T	T									S	S			S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	Y	I	S	I	S	P	S	E	T	Y	I	A	A	G	D	V	M	G	K	I	L	L	Y	D	L	Q	S	R	E	V	K	T	S	R	W	A	F	R	T	S	K	I	N	A	I	S	W	K	P	A	E	E	I	E	E	D	L	V	A	T	G	S	L	D	T	N	I	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S	S							T	T	S							T	T	T	T							S				S	S																							T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
Sequence	Y	S	V	K	R	P	M	K	I	I	K	A	L	N	A	H	K	D	G	V	N	N	L	L	W	E	T	P	S	T	L	V	S	S	G	A	D	A	C	I	K	R	W	N	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		T	T						S	S	S	S	T	T										T	T							T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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