Fold library entry viewer: c1pemA_

Added to library: Tue Mar 16 13:57:26 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	M	D	Y	H	A	L	N	A	M	L	N	L	Y	D	K	A	G	H	I	Q	F	D	K	D	Q	Q	A	I	D	A	F	F	A	T	H	V	R	P	H	S	V	T	F	A	S	Q	H	E	R	L	G	T	L	V	R	E	G	Y	Y	D	D	A	V	L	A	R	Y	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G				T	T	S				T														T					B				S												T	T	S	B						T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	F	V	L	R	L	F	E	H	A	H	A	S	G	F	R	F	Q	T	F	L	G	A	W	K	F	Y	T	S	Y	T	L	K	T	F	D	G	K	R	Y	L	E	H	F	E	D	R	V	T	M	V	A	L	T	L	A	Q	G	D	E	T	L	A	T	Q	L	T	D	E	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	S					S	S											T	S		B		T	T	S	S	S	B																	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	S	G	R	F	Q	P	A	T	P	T	F	L	N	C	G	K	Q	Q	R	G	E	L	V	S	C	F	L	L	R	I	E	D	N	M	E	S	I	G	R	A	V	N	S	A	L	Q	L	S	K	R	G	G	G	V	A	F	L	L	S	N	L	R	E	A	G	A	P	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S											T	T	B	S	S				S										S	S																T	T	T								T	T	S			T	T			B	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	I	E	N	Q	S	S	G	V	I	P	V	M	K	M	L	E	D	A	F	S	Y	A	N	Q	G	A	G	A	V	Y	L	H	A	H	H	P	D	I	L	R	F	L	D	T	K	R	E	N	A	D	E	K	I	R	I	K	T	L	S	L	G	V	V	I	P	D	I	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B	S	S					S														T											T	T	S	T	T							T	T		T	T	S		T	T	S			S	S	S								S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	L	A	K	E	N	A	Q	M	A	L	F	S	P	Y	D	I	Q	R	R	Y	G	K	P	F	G	D	I	A	I	S	E	R	Y	D	E	L	I	A	D	P	H	V	R	K	T	Y	I	N	A	R	D	F	F	Q	T	L	A	E	I	Q	F	E	S	G	Y	P	Y	I	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T																S	S		G	G	G	S		T	T	T	T								T	T	S																						S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	E	D	T	V	N	R	A	N	P	I	A	G	R	I	N	M	S	N	L	C	S	E	I	L	Q	V	N	S	A	S	R	Y	D	D	N	L	D	Y	T	H	I	G	H	D	I	S	C	N	L	G	S	L	N	I	A	H	V	M	D	S	P	D	I	G	R	T	V	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S							T	T	S							B						T	T	S							B																T		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	I	R	G	L	T	A	V	S	D	M	S	H	I	R	S	V	P	S	I	A	A	G	N	A	A	S	H	A	I	G	L	G	Q	M	N	L	H	G	Y	L	A	R	E	G	I	A	Y	G	S	P	E	A	L	D	F	T	N	L	Y	F	Y	T	I	T	W	H	A	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	S																											T	T			T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	S	M	R	L	A	R	E	R	G	K	T	F	A	G	F	A	Q	S	R	Y	A	S	G	D	Y	F	T	Q	Y	L	Q	D	D	W	Q	P	K	T	A	K	V	R	A	L	F	A	R	S	G	I	T	L	P	T	R	E	M	W	L	K	L	R	D	D	V	M	R	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T				T	T	G	G	G	S					T								S	S			S		S		S										T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	Y	N	Q	N	L	Q	A	V	P	P	T	G	S	I	S	Y	I	N	H	A	T	S	S	I	H	P	I	V	A	K	I	E	I	R	K	E	G	K	T	G	R	V	Y	Y	P	A	P	F	M	T	N	E	N	L	D	M	Y	Q	D	A	Y	D	I	G	P	E	K	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		S			B		B					T						T			S	S	S	S			S		S							S	T	T	S							T	T			T	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.
Sequence	D	T	Y	A	E	A	T	R	H	V	D	Q	G	L	S	L	T	L	F	F	P	D	T	A	T	T	R	D	I	N	K	A	Q	I	Y	A	W	R	K	G	I	K	S	L	Y	Y	I	R	L	R	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		S	S		B								T	T																	T

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PDB structure

FASTA sequence

Hidden Markov model

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