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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1pdiQ_

Fold library idPDB HeaderMoleculeTitle
c1pdiQ_PDB header: structural proteinChain: Q: PDB Molecule: short tail fiber protein;PDBTitle: fitting of the c-terminal part of the short tail fibers2 into the cryo-em reconstruction of t4 baseplate


Added to library: Tue Mar 16 13:24:36 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LNGRGSTTSMRGVVKLTTTAGSQSGGDASSALAWNADVIHQRGGQTINGTLRINNTLTIASGGANITGTV
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Known secondary structure (DSSP)
TTS

BTTB




B
SSTT

TTS
TT
B

SS
S


TT




SS



SS




SS



SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence NMTGGYIQGKRVVTQNEIDRTIPVGAIMMWAADSLPSDAWRFCHGGTVSASDCPLYASRIGTRYGGSSSN
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Known secondary structure (DSSP)

S

TT


GGGGGGTS
SS
SSS

SSTTSSS



TTT
TTSSSTTSB
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PGLPDMRGLFVRGSGRGSHLTNPNVNGNDQFGKPRLGVGCTGGYVGEVQIQQMSYHKHAGGFGEHDDLGA
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Known secondary structure (DSSP) B




SS




SS


TTTSS

TTS


TTTT



SSS













S


SSS

T
 .........220.........230.........240.........250.........260.........270........
Sequence FGNTRRSNFVGTRKGLDWDNRSYFTNDGYEIDPESQRNSKYTLNRPELIGNETRPWNISLNYIIKVKE
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Known secondary structure (DSSP) T



SSS




S


S
S






SS

S
GGG

TTS

SSTT

SS



S







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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