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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c1p9hA_ | PDB header: cell adhesion | Chain: A: PDB Molecule: invasin; | PDBTitle: crystal structure of the collagen-binding domain of2 yersinia adhesin yada |
Added to library: Tue Mar 16 13:03:02 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | P | N | L | T | A | V | Q | I | S | P | N | A | D | P | A | L | G | L | E | Y | G | L | N | A | S | A | K | G | I | H | S | I | A | I | G | A | T | A | E | A | A | K | G | A | A | V | A | V | G | A | G | S | I | A | T | G | V | N | S | V | A | I | G | P | L | S | K | A | L | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | D | S | A | V | T | Y | G | A | A | S | T | A | Q | K | D | G | V | A | I | G | A | R | A | S | T | S | D | T | G | V | A | V | G | F | N | S | K | A | D | A | K | N | S | V | A | I | G | H | S | S | H | V | A | A | N | H | G | Y | S | I | A | I | G | D | R | S | K | T | D | R |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | T | T | S | T | T | ![]() | ![]() | ![]() | S | T | T | B | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
Sequence | E | N | S | V | S | I | G | H | E | S | L | N | R | Q | L | T | H | L | A | A | G | T | K | D | T | D | A | V | N | V | A | Q | L | K | K | E | I | E | K | |||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | ![]() | ![]() | S | B | T | T | B | S | S | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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