PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1p6gE_

Fold library id	PDB Header	Molecule	Title
c1p6gE_	PDB header: ribosome	Chain: E: PDB Molecule: 30s ribosomal protein s5;	PDBTitle: real space refined coordinates of the 30s subunit fitted2 into the low resolution cryo-em map of the ef-g.gtp state3 of e. coli 70s ribosome

Links to external resources
Added to library: Tue Mar 16 12:55:00 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E L Q E K L I A V N R V S K T V K G G R I F S F T A L T V V G D G N G R V G F G Y G K A R E V P A A I Q K A M E K A R R N M I N V A L N N G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S S S S S
B T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T L Q H P V K G V H T G S R V F M Q P A S E G T G I I A G G A M R A V L E V A G V H N V L A K A Y G S T N P I N V V R A T I D G L E N M N S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
S S
T T
T T S
S
T T
S

. . . . . . . .

Sequence P E M V A A K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	L	Q	E	K	L	I	A	V	N	R	V	S	K	T	V	K	G	G	R	I	F	S	F	T	A	L	T	V	V	G	D	G	N	G	R	V	G	F	G	Y	G	K	A	R	E	V	P	A	A	I	Q	K	A	M	E	K	A	R	R	N	M	I	N	V	A	L	N	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	S														S	S	S										S	S															S							B	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	L	Q	H	P	V	K	G	V	H	T	G	S	R	V	F	M	Q	P	A	S	E	G	T	G	I	I	A	G	G	A	M	R	A	V	L	E	V	A	G	V	H	N	V	L	A	K	A	Y	G	S	T	N	P	I	N	V	V	R	A	T	I	D	G	L	E	N	M	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		S	S							T	T										T	T	S				S											T	T										S
	.	.	.	.	.	.	.	.
Sequence	P	E	M	V	A	A	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)