PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1oysA_

Fold library id	PDB Header	Molecule	Title
c1oysA_	PDB header: transferase	Chain: A: PDB Molecule: ribonuclease ph;	PDBTitle: crystal structure of the phosphorolytic exoribonuclease2 rnase ph from bacillus subtilis

Links to external resources
Added to library: Wed Jan 9 20:29:34 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M R H D G R Q H D E L R P I T F D L D E G S V L I T A G N T K V I C N A S V E D R V P P F L R G G G K G W I T A E Y S M G R T M E I Q R L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T
T T S
G G G T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G R A L R A V V D L E K L G E R T I W I D C D V I Q A D G G T R T A S I T G A F L A M A I A I G K L I K A G T I K T N P I T D F L A A I S V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T B
S
S S
T T S S S S
B
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G I D K E Q G I L L D L N Y E E D S S A E V D M N V I M T G S G R F V E L Q G T G E E A T F S R E D L N G L L G L A E K G I Q E L I D K Q K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
T T S
S S

. . .

Sequence E V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	R	H	D	G	R	Q	H	D	E	L	R	P	I	T	F	D	L	D	E	G	S	V	L	I	T	A	G	N	T	K	V	I	C	N	A	S	V	E	D	R	V	P	P	F	L	R	G	G	G	K	G	W	I	T	A	E	Y	S	M	G	R	T	M	E	I	Q	R	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S			T	T																			T	T											S				G	G	G	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	R	A	L	R	A	V	V	D	L	E	K	L	G	E	R	T	I	W	I	D	C	D	V	I	Q	A	D	G	G	T	R	T	A	S	I	T	G	A	F	L	A	M	A	I	A	I	G	K	L	I	K	A	G	T	I	K	T	N	P	I	T	D	F	L	A	A	I	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	B							S													S	S																								T	T	S	S	S	S			B		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	I	D	K	E	Q	G	I	L	L	D	L	N	Y	E	E	D	S	S	A	E	V	D	M	N	V	I	M	T	G	S	G	R	F	V	E	L	Q	G	T	G	E	E	A	T	F	S	R	E	D	L	N	G	L	L	G	L	A	E	K	G	I	Q	E	L	I	D	K	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T					S																			T	T	S										S	S
	.	.	.
Sequence	E	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)