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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1otnA_

Fold library idPDB HeaderMoleculeTitle
c1otnA_PDB header: cell adhesionChain: A: PDB Molecule: internalin b;PDBTitle: calcium-binding mutant of the internalin b lrr domain


Added to library: Tue Mar 16 13:34:23 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ETITVSTPIKQIFPDAAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFL
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Known secondary structure (DSSP)


SS


STT
S
TTS
T


TTS




TTGGG
TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence NGNKLTDIKPLTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNK
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Known secondary structure (DSSP)
SS




GGGTT
TT



SS



GGGGTT
TT



SS




GGGGG
TT



SS
 .........150.........160.........170.........180.........190.........200.......
Sequence ITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQEC
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Known secondary structure (DSSP)



GGGGG
TT
S

SS




GGGTT
TT



SS




GGGTT






S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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