Fold library entry viewer: c1oqzB_

Added to library: Tue Mar 16 13:22:23 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	Q	A	P	I	A	A	Y	K	P	R	S	N	E	I	L	W	D	G	Y	G	V	P	H	I	Y	G	V	D	A	P	S	A	F	Y	G	Y	G	W	A	Q	A	R	S	H	G	D	N	I	L	R	L	Y	G	E	A	R	G	K	G	A	E	Y	W	G	P	D	Y	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S								S	S							T	T	S							S	S																												T	T								G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	T	V	W	L	L	T	N	G	V	P	E	R	A	Q	Q	W	Y	A	Q	Q	S	P	D	F	R	A	N	L	D	A	F	A	A	G	I	N	A	Y	A	Q	Q	N	P	D	D	I	S	P	D	V	R	Q	V	L	P	V	S	G	A	D	V	V	A	H	A	H	R	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T											T	S																							G	G	G	S						T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	F	L	Y	V	A	S	P	G	R	T	L	G	E	G	D	P	P	D	L	A	D	Q	G	S	N	S	W	A	V	A	P	G	K	T	A	N	G	N	A	L	L	L	Q	N	P	H	L	S	W	T	T	D	Y	F	T	Y	Y	E	A	H	L	V	T	P	D	F	E	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T							T	T	S																		G	G	G	B	S	S	S												S	S		G	G	G										S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	A	T	Q	I	G	L	P	V	I	R	F	A	F	N	Q	R	M	G	I	T	N	T	V	N	G	M	V	G	A	T	N	Y	R	L	T	L	Q	D	G	G	Y	L	Y	D	G	Q	V	R	P	F	E	R	P	Q	A	S	Y	R	L	R	Q	A	D	G	T	T	V	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		S	S		S					S	S																						T	T					T	T						B											T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	L	E	I	R	S	S	V	H	G	P	V	F	E	R	A	D	G	T	A	V	A	V	R	V	A	G	L	D	R	P	G	M	L	E	Q	Y	F	D	M	I	T	A	D	S	F	D	D	Y	E	A	A	L	A	R	M	Q	V	P	T	F	N	I	V	Y	A	D	R	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S						T	T	S								T	T	T	T													T		S	S									T	T			S		S								T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	I	N	Y	S	F	N	G	V	A	P	K	R	A	E	G	D	I	A	F	W	Q	G	L	V	P	G	D	S	S	R	Y	L	W	T	E	T	H	P	L	D	D	L	P	R	V	T	N	P	P	G	G	F	V	Q	N	S	N	D	P	P	W	T	P	T	W	P	V	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S			B			S	S								S				S	S		G	G	G					B			G	G	G	S					S		T	T	S					S	S	S		T	T		S	S	S	S		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	P	K	D	F	P	S	Y	L	A	P	Q	T	P	H	S	L	R	A	Q	Q	S	V	R	L	M	S	E	N	D	D	L	T	L	E	R	F	M	A	L	Q	L	S	H	R	A	V	M	A	D	R	T	L	P	D	L	I	P	A	A	L	I	D	P	D	P	E	V	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S		T	T	S	S																		T			S	B										T			B																	T	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	A	R	L	L	A	A	W	D	R	E	F	T	S	D	S	R	A	A	L	L	F	E	E	W	A	R	L	F	A	G	Q	N	F	A	G	Q	A	G	F	A	T	P	W	S	L	D	K	P	V	S	T	P	Y	G	V	R	D	P	K	A	A	V	D	Q	L	R	T	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	B			T	T		S	S												S		T	T	S				T	T		S	B				T	T	S	T	T	T		S	B	S		S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	N	T	K	R	K	Y	G	A	I	D	R	P	F	G	D	A	S	R	M	I	L	N	D	V	N	V	P	G	A	A	G	Y	G	N	L	G	S	F	R	V	F	T	W	S	D	P	D	E	N	G	V	R	T	P	V	H	G	E	T	W	V	A	M	I	E	F	S	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S	S							B					T	T								B		G	G	G	T		S	S	B								T	T	S		B																S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
Sequence	V	R	A	Y	G	L	M	S	Y	G	N	S	R	Q	P	G	T	T	H	Y	S	D	Q	I	E	R	V	S	R	A	D	F	R	E	L	L	L	R	R	E	Q	V	E	A	A	V	Q	E	R	T	P	F	N	F	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		S			S	T	T		S	S	S	S	S	S						T	T								S

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PDB structure

FASTA sequence

Hidden Markov model

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