Fold library entry viewer: c1okqA_

Added to library: Tue Mar 16 12:45:18 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	G	P	C	V	A	E	S	E	P	A	L	L	T	G	S	K	Q	F	G	L	S	R	N	S	H	I	A	I	A	F	D	D	T	K	V	K	N	R	L	T	I	E	L	E	V	R	T	E	A	E	S	G	L	L	F	Y	M	A	R	I	N	H	A	A	F	A	T	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S								B		T	T						S	S	T	T									T	T	S	S	S	S													S										T	T	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	R	N	G	F	P	Y	F	S	Y	D	L	G	S	G	D	T	S	T	M	I	P	T	K	I	N	D	G	Q	W	H	K	I	K	I	V	R	V	K	Q	E	G	I	L	Y	V	D	D	A	S	S	Q	T	I	S	P	K	K	A	D	I	L	A	V	V	G	I	L	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T									S	S								S	S				S	S	S										T	T							T	T								S	S	S								S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	G	L	P	I	N	Y	T	T	R	R	I	G	P	V	T	Y	S	L	D	G	C	V	R	N	L	H	M	E	Q	A	P	V	D	L	D	Q	P	T	S	S	F	H	V	G	T	C	F	A	N	A	E	S	G	T	Y	F	D	G	T	G	F	A	K	A	V	G	G	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S			T	T					S	S		S			S	B		S									S	S	S				T	T	S		S				S		B			B	S	S				S													S	S	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	G	L	D	L	L	V	E	F	E	F	R	T	T	R	P	T	G	V	L	L	G	V	S	S	Q	K	M	D	G	M	G	I	E	M	I	D	E	K	L	M	F	H	V	D	N	G	A	G	R	F	T	A	I	Y	D	A	E	I	P	G	H	M	C	N	G	Q	W	H	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	S											S		S										S	S	S									T	T								S	S	S											S	T	T	S	T	T	S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	T	A	K	K	I	K	N	R	L	E	L	V	V	D	G	N	Q	V	D	A	Q	S	P	N	S	A	S	T	S	A	D	T	N	D	P	V	F	V	G	G	F	P	G	G	L	N	Q	F	G	L	T	T	N	I	R	F	R	G	C	I	R	S	L	K	L	T	K	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T							T	T								S		T	T				B				B					S				T	T				T	T		S				B													S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Sequence	G	K	P	L	E	V	N	F	A	K	A	L	E	L	R	G	V	Q	P	V	S	C	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							G	G	G		S							S	S

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PDB structure

FASTA sequence

Hidden Markov model

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