Fold library entry viewer: c1ojtA_

Added to library: Tue Mar 16 12:15:28 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	S	A	D	A	E	Y	D	V	V	V	L	G	G	G	P	G	G	Y	S	A	A	F	A	A	A	D	E	G	L	K	V	A	I	V	E	R	Y	K	T	L	G	G	V	C	L	N	V	G	C	I	P	S	K	A	L	L	H	N	A	A	V	I	D	E	V	R	H	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S												S													T	T								S	S	S		S	S							S																				G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	N	G	I	K	Y	P	E	P	E	L	D	I	D	M	L	R	A	Y	K	D	G	V	V	S	R	L	T	G	G	L	A	G	M	A	K	S	R	K	V	D	V	I	Q	G	D	G	Q	F	L	D	P	H	H	L	E	V	S	L	T	A	G	D	A	Y	E	Q	A	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T																																			T	T													T	T												T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	G	E	K	K	I	V	A	F	K	N	C	I	I	A	A	G	S	R	V	T	K	L	P	F	I	P	E	D	P	R	I	I	D	S	S	G	A	L	A	L	K	E	V	P	G	K	L	L	I	I	G	G	G	I	I	G	L	E	M	G	T	V	Y	S	T	L	G	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S	S					T	T								T	T						S						S		S														T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	D	V	V	E	M	M	D	G	L	M	Q	G	A	D	R	D	L	V	K	V	W	Q	K	Q	N	E	Y	R	F	D	N	I	M	V	N	T	K	T	V	A	V	E	P	K	E	D	G	V	Y	V	T	F	E	G	A	N	A	P	K	E	P	Q	R	Y	D	A	V	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S	S	S	S	T	T	S													G	G	G							S										T	T								S	S	S			S	S					S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	A	G	R	A	P	N	G	K	L	I	S	A	E	K	A	G	V	A	V	T	D	R	G	F	I	E	V	D	K	Q	M	R	T	N	V	P	H	I	Y	A	I	G	D	I	V	G	Q	P	M	L	A	H	K	A	V	H	E	G	H	V	A	A	E	N	C	A	G	H	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G	T	T	G	G	G	T	T					T	T	S						T	T	S	B		S	S	T	T					G	G	G	T		S	S																		T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	Y	F	D	A	R	V	I	P	G	V	A	Y	T	S	P	E	V	A	W	V	G	E	T	E	L	S	A	K	A	S	A	R	K	I	T	K	A	N	F	P	W	A	A	S	G	R	A	I	A	N	G	C	D	K	P	F	T	K	L	I	F	D	A	E	T	G	R	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S	S																T										G	G	G							T	T			S									T	T	T		B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
Sequence	G	G	G	I	V	G	P	N	G	G	D	M	I	G	E	V	C	L	A	I	E	M	G	C	D	A	A	D	I	G	K	T	I	H	P	H	P	T	L	G	E	S	I	G	M	A	A	E	V	A	L	G	T	C	T	D	L	P	P	Q	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	T	T														T	T		B						T	S				S	S	S	S	T	T											T			T	T	S	S		S

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PDB structure

FASTA sequence

Hidden Markov model

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