PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1o0wB_

Fold library id	PDB Header	Molecule	Title
c1o0wB_	PDB header: hydrolase	Chain: B: PDB Molecule: ribonuclease iii;	PDBTitle: crystal structure of ribonuclease iii (tm1102) from2 thermotoga maritima at 2.0 a resolution

Links to external resources
Added to library: Tue Mar 16 12:24:55 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H H M N E S E R K I V E E F Q K E T G I N F K N E E L L F R A L C H S S Y A N E Q N Q A G R K D V E S N E K L E F L G D A V L E L F V C E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S B
T T
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L Y K K Y P E A E V G D L A R V K S A A A S E E V L A M V S R K M N L G K F L F L G K G E E K T G G R D R D S I L A D A F E A L L A A I Y L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T S T T G G G T
B
T T G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D Q G Y E K I K E L F E Q E F E F Y I E K I M K G E M L F D Y K T A L Q E I V Q S E H K V P P E Y I L V R T E K N D G D R I F V V E V R V N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
S S
S S S T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . .

Sequence G K T I A T G K G R T K K E A E K E A A R I A Y E K L L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	H	M	N	E	S	E	R	K	I	V	E	E	F	Q	K	E	T	G	I	N	F	K	N	E	E	L	L	F	R	A	L	C	H	S	S	Y	A	N	E	Q	N	Q	A	G	R	K	D	V	E	S	N	E	K	L	E	F	L	G	D	A	V	L	E	L	F	V	C	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							S	S									B											T	T		T	T				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	Y	K	K	Y	P	E	A	E	V	G	D	L	A	R	V	K	S	A	A	A	S	E	E	V	L	A	M	V	S	R	K	M	N	L	G	K	F	L	F	L	G	K	G	E	E	K	T	G	G	R	D	R	D	S	I	L	A	D	A	F	E	A	L	L	A	A	I	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S													T	S											T	T	G	G	G	T		B								T	T	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	Q	G	Y	E	K	I	K	E	L	F	E	Q	E	F	E	F	Y	I	E	K	I	M	K	G	E	M	L	F	D	Y	K	T	A	L	Q	E	I	V	Q	S	E	H	K	V	P	P	E	Y	I	L	V	R	T	E	K	N	D	G	D	R	I	F	V	V	E	V	R	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T				S															S	S													S	S	S										T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Sequence	G	K	T	I	A	T	G	K	G	R	T	K	K	E	A	E	K	E	A	A	R	I	A	Y	E	K	L	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									S	S																S