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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1nqbC_

Fold library idPDB HeaderMoleculeTitle
c1nqbC_PDB header: immunoglobulinChain: C: PDB Molecule: single-chain antibody fragment;PDBTitle: trivalent antibody fragment


Added to library: Tue Mar 16 13:34:11 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VQLQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLT
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Known secondary structure (DSSP) -




TT


SS
GGGS
TTT
TTT


GGGTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASI
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Known secondary structure (DSSP) GGGT
S

GGG


SSSS
S
S








S
TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence SCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVY
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Known secondary structure (DSSP) SS

B
TTS
B

TTS

TTT
TT

TTTTSS

GGG
 .........220.........230..
Sequence YCFQGSHVPYTFGGGTKLEIKR
Predicted secondary structure








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Known secondary structure (DSSP)
SSSS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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