Fold library entry viewer: c1njzA_

Added to library: Tue Mar 16 13:31:25 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	K	M	A	F	T	L	A	D	R	V	T	E	E	M	L	A	D	K	A	A	L	V	V	E	V	V	E	E	N	Y	H	D	A	P	I	V	G	I	A	V	V	N	E	H	G	R	F	F	L	R	P	E	T	A	L	A	D	P	Q	F	V	A	W	L	G	D	E	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S			G	G	G			S										S	S	S		T	T											T	T											T	T											T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	K	S	M	F	D	S	K	R	A	A	V	A	L	K	W	K	G	I	E	L	C	G	V	S	F	D	L	L	L	A	A	Y	L	L	D	P	A	Q	G	V	D	D	V	A	A	A	A	K	M	K	Q	Y	E	A	V	R	P	D	E	A	V	Y	G	K	G	A	K	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S											T	T																			G	G	G				S							T	T	T			S	S									S	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	P	D	E	P	V	L	A	E	H	L	V	R	K	A	A	A	I	W	E	L	E	R	P	F	L	D	E	L	R	R	N	E	Q	D	R	L	L	V	E	L	E	Q	P	L	S	S	I	L	A	E	M	E	F	A	G	V	K	V	D	T	K	R	L	E	Q	M	G	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																T	T								T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	A	E	Q	L	G	T	V	E	Q	R	I	Y	E	L	A	G	Q	E	F	N	I	N	S	P	K	Q	L	G	V	I	L	F	E	K	L	Q	L	P	V	L	K	K	T	K	T	G	Y	S	T	S	A	D	V	L	E	K	L	A	P	Y	H	E	I	V	E	N	I	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	S				T	T											T	T	S					S		B		S	S	S	B								T	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	R	Q	L	G	K	L	Q	S	T	Y	I	E	G	L	L	K	V	V	R	P	D	T	K	K	V	H	T	I	F	N	Q	A	L	T	Q	T	G	R	L	S	S	T	E	P	N	L	Q	N	I	P	I	R	L	E	E	G	R	K	I	R	Q	A	F	V	P	S	E	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T								S		T	T	T									S	S			S	S	S						S	S		T	T					S	S					G	G	G	G	G				S	S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	W	L	I	F	A	A	D	Y	S	Q	I	E	L	R	V	L	A	H	I	A	E	D	D	N	L	M	E	A	F	R	R	D	L	D	I	H	T	K	T	A	M	D	I	F	Q	V	S	E	D	E	V	T	P	N	M	R	R	Q	A	K	A	V	N	F	G	I	V	Y	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S											T										T	T													T			G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	D	Y	G	L	A	Q	N	L	N	I	S	R	K	E	A	A	E	F	I	E	R	Y	F	E	S	F	P	G	V	K	R	Y	M	E	N	I	V	Q	E	A	K	Q	K	G	Y	V	T	T	L	L	H	R	R	R	Y	L	P	D	I	T	S	R	N	F	N	V	R	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T																																			S					T	T							G	G	G	G		S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	E	R	M	A	M	N	T	P	I	Q	G	S	A	A	D	I	I	K	K	A	M	I	D	L	N	A	R	L	K	E	E	R	L	Q	A	H	L	L	L	Q	V	H	D	E	L	I	L	E	A	P	K	E	E	M	E	R	L	C	R	L	V	P	E	V	M	E	Q	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																T	T										S	S								G	G	G															S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
Sequence	T	L	R	V	P	L	K	V	D	Y	H	Y	G	S	T	W	Y	D	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S										S	S	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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