Fold library entry viewer: c1nhqA_

Added to library: Tue Mar 16 12:33:48 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	V	I	V	L	G	S	S	H	G	G	Y	E	A	V	E	E	L	L	N	L	H	P	D	A	E	I	Q	W	Y	E	K	G	D	F	I	S	F	L	S	S	G	M	Q	L	Y	L	E	G	K	V	K	D	V	N	S	V	R	Y	M	T	G	E	K	M	E	S	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S															T	T	S							S	S	S	S	S	S	B		G	G	G						T	T	S	S			G	G	G	S	B	S									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	N	V	F	S	N	T	E	I	T	A	I	Q	P	K	E	H	Q	V	T	V	K	D	L	V	S	G	E	E	R	V	E	N	Y	D	K	L	I	I	S	P	G	A	V	P	F	E	L	D	I	P	G	K	D	L	D	N	I	Y	L	M	R	G	R	Q	W	A	I	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T								T	T	T	T							T	T	T									S															S	T	T	T	T		B	T					S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	Q	K	T	V	D	P	E	V	N	N	V	V	V	I	G	S	G	Y	I	G	I	E	A	A	E	A	F	A	K	A	G	K	K	V	T	V	I	D	I	L	D	R	P	L	G	V	Y	L	D	K	E	F	T	D	V	L	T	E	E	M	E	A	N	N	I	T	I	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T		T	T										S													T	T								S	S	S	S	T	T	T	T	T																T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	E	T	V	E	R	Y	E	G	D	G	R	V	Q	K	V	V	T	D	K	N	A	Y	D	A	D	L	V	V	V	A	V	G	V	R	P	N	T	A	W	L	K	G	T	L	E	L	H	P	N	G	L	I	K	T	D	E	Y	M	R	T	S	E	P	D	V	F	A	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									S	S	B							S	S						S						S					S		G	G	G	T	T	T	S		B		T	T	S		B				T	T		B		S	S	T	T					G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	A	T	L	I	K	Y	N	P	A	D	T	E	V	N	I	A	L	A	T	N	A	R	K	Q	G	R	F	A	V	K	N	L	E	E	P	V	K	P	F	P	G	V	Q	G	S	S	G	L	A	V	F	D	Y	K	F	A	S	T	G	I	N	E	V	M	A	Q	K	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	B					G	G	G	T																					T	S	S	S								B									T	T																	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	E	T	K	A	V	T	V	V	E	D	Y	L	M	D	F	N	P	D	K	Q	K	A	W	F	K	L	V	Y	D	P	E	T	T	Q	I	L	G	A	Q	L	M	S	K	A	D	L	T	A	N	I	N	A	I	S	L	A	I	Q	A	K	M	T	I	E	D	L	A	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S		T	T		T	T												T	T	T		B									S	S			T	T											T	T		B						T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Sequence	D	F	F	F	Q	P	A	F	D	K	P	W	N	I	I	N	T	A	A	L	E	A	V	K	Q	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T			S	S														T

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PDB structure

FASTA sequence

Hidden Markov model

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