Fold library entry viewer: c1naaB_

Added to library: Tue Mar 16 14:26:31 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	P	Y	D	Y	I	I	V	G	A	G	P	G	G	I	I	A	A	D	R	L	S	E	A	G	K	K	V	L	L	L	E	R	G	G	P	S	T	K	Q	T	G	G	T	Y	V	A	P	W	A	T	S	S	G	L	T	K	F	D	I	P	G	L	F	E	S	L	F	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S													T	T								S	S				S	G	G	G	T						G	G	G	T	T	T	T			T	T	T		G	G	G	G	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	N	P	F	W	W	C	K	D	I	T	V	F	A	G	C	L	V	G	G	G	T	S	V	N	G	A	L	Y	W	Y	P	N	D	G	D	F	S	S	S	V	G	W	P	S	S	W	T	N	H	A	P	Y	T	S	K	L	S	S	R	L	P	S	T	D	H	P	S	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		T	T	B		T	T	B	S	S			B		S	T	T	G	G	G	G	T	S			B						G	G	G	G		G	G	G	T			G	G	G	S													S			B	S			S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	Q	R	Y	L	E	Q	S	F	N	V	V	S	Q	L	L	K	G	Q	G	Y	N	Q	A	T	I	N	D	N	P	N	Y	K	D	H	V	F	G	Y	S	A	F	D	F	L	N	G	K	R	A	G	P	V	A	T	Y	L	Q	T	A	L	A	R	P	N	F	T	F	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				S													T	T	T						G	G	G		T	T			T	T							B				T	T								T							T		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	V	M	V	S	N	V	V	R	N	G	S	Q	I	L	G	V	Q	T	N	D	P	T	L	G	P	N	G	F	I	P	V	T	P	K	G	R	V	I	L	S	A	G	A	F	G	T	S	R	I	L	F	Q	S	G	I	G	P	T	D	M	I	Q	T	V	Q	S	N	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										T	T								S		T	T	S	S	G	G	G														S												T	T	B	S										T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	A	A	A	L	P	P	Q	N	Q	W	I	N	L	P	V	G	M	N	A	Q	D	N	P	S	I	N	L	V	F	T	H	P	S	I	D	A	Y	E	N	W	A	D	V	W	S	N	P	R	P	A	D	A	A	Q	Y	L	A	N	Q	S	G	V	F	A	G	A	S	P	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S			G	G	G		B				T	T	T	T	B	B												T	T				G	G	G	G	T	T	T	T	T	S													S		S	G	G	G	S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	N	F	W	R	A	Y	S	G	S	D	G	F	T	R	Y	A	Q	G	T	V	R	P	G	A	A	S	V	N	S	S	L	P	Y	N	A	S	Q	I	F	T	I	T	V	Y	L	S	T	G	I	Q	S	R	G	R	I	G	I	D	A	A	L	R	G	T	V	L	T	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S												S		S					S	S				G	G	G										T	T					B						T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	W	L	V	N	P	V	D	K	T	V	L	L	Q	A	L	H	D	V	V	S	N	I	G	S	I	P	G	L	T	M	I	T	P	D	V	T	Q	T	L	E	E	Y	V	D	A	Y	D	P	A	T	M	N	S	N	H	W	V	S	S	T	T	I	G	S	S	P	Q	S	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S																T	T	G	G	G	S	T	T						S		T	T	S									S		G	G	G	G			S			B		T	T		B		S		T	T	T		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Sequence	V	D	S	N	V	K	V	F	G	T	N	N	L	F	I	V	D	A	G	I	I	P	H	L	P	T	G	N	P	Q	G	T	L	M	S	A	A	E	Q	A	A	A	K	I	L	A	L	A	G	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		T	T	S	B	B	T	T		S	S					S	G	G	G		S	S			S	S		T																		S	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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