Fold library entry viewer: c1n54A_

Added to library: Tue Mar 16 13:10:14 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	N	E	T	E	D	H	L	E	S	L	I	C	K	V	G	E	K	S	A	C	S	L	E	S	N	L	E	G	L	A	G	V	L	E	A	D	L	P	N	Y	K	S	K	I	L	R	L	L	C	T	V	A	R	L	L	P	E	K	L	T	I	Y	T	T	L	V	G	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T															S			S	S															T	T	S	T	T	T																G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	A	R	N	Y	N	F	G	G	E	F	V	E	A	M	I	R	Q	L	K	E	S	L	K	A	N	N	Y	N	E	A	V	Y	L	V	R	F	L	S	D	L	V	N	C	H	V	I	A	A	P	S	M	V	A	M	F	E	N	F	V	S	V	T	Q	E	E	D	V	P	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																						T	T																G	G	G	T	S	B														G	G	G	G		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	R	R	D	W	Y	V	Y	A	F	L	S	S	L	P	W	V	G	K	E	L	Y	E	K	K	D	A	E	M	D	R	I	F	A	N	T	E	S	Y	L	K	R	R	Q	K	T	H	V	P	M	L	Q	V	W	T	A	D	K	P	H	P	Q	E	E	Y	L	D	C	L	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	S	S	S	T	T	T	T	T												T				T	T						S	B				S	S	S				B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	Q	I	Q	K	L	K	K	D	R	W	Q	E	R	H	I	L	R	P	Y	L	A	F	D	S	I	L	C	E	A	L	Q	H	N	L	P	P	F	T	P	P	P	H	T	E	D	S	V	Y	P	M	P	R	V	I	F	R	M	F	D	Y	T	D	D	P	E	G	P	V	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	T			S	S	S			G	G	G	T	T					T	T	S			B												T	T								B							T	T	T	S		S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	G	S	H	S	V	E	R	F	V	I	E	E	N	L	H	C	I	I	K	S	H	W	K	E	R	K	T	C	A	A	Q	L	V	S	Y	P	G	K	N	K	I	P	L	N	Y	H	I	V	E	V	I	F	A	E	L	F	Q	L	P	A	P	P	H	I	D	V	M	Y	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S																	S		S											T				S	S																	T		S	S			S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	L	L	I	E	L	C	K	L	Q	P	G	S	L	P	Q	V	L	A	Q	A	T	E	M	L	Y	M	R	L	D	T	M	N	T	T	C	V	D	R	F	I	N	W	F	S	H	H	L	S	N	F	Q	F	R	W	S	W	E	D	W	S	D	C	L	S	Q	D	P	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	T															T	G	G	G	B																		T	T	T	T				G	G	G	G	T	T	S	T	T	S		T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	K	P	K	F	V	R	E	V	L	E	K	C	M	R	L	S	Y	H	Q	R	I	L	D	I	V	P	P	T	F	S	A	L	C	P	A	N	P	T	C	I	Y	K	Y	G	D	E	S	S	N	S	L	P	G	H	S	V	A	L	C	L	A	V	A	F	K	S	K	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	S									S		G	G	G	G	G	G	S									T	T	S	S						S	T	T													T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	D	E	I	F	S	I	L	K	D	V	P	N	F	N	P	L	K	I	E	V	F	V	Q	T	L	L	H	L	A	A	K	S	F	S	H	S	F	S	A	L	A	K	F	H	E	V	F	K	T	L	A	E	S	D	E	G	K	L	H	V	L	R	V	M	F	E	V	W	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S																				T		S												T										S																T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	H	P	Q	M	I	A	V	L	V	D	K	M	I	R	T	Q	I	V	D	C	A	A	V	A	N	W	I	F	S	S	E	L	S	R	D	F	T	R	L	F	V	W	E	I	L	H	S	T	I	R	K	M	N	K	H	V	L	K	I	Q	K	E	L	E	E	A	K	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T															T	T	S	S										T	S	G	G	G	T	T	T	T	T	S																													T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	E	E	Q	I	E	R	L	Q	E	K	V	E	S	A	Q	S	E	Q	K	N	L	F	L	V	I	F	Q	R	F	I	M	I	L	T	E	H	L	V	R	C	E	T	D	G	T	S	V	L	T	P	W	Y	K	N	C	I	E	R	L	Q	Q	I	F	L	Q	H	H	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																							T					S				S																			S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
Sequence	I	Q	Q	Y	M	V	T	L	E	N	L	L	F	T	A	E	L	D	P	H	I	L	A	V	F	Q	Q	F	C	A	L	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G							T	T	S		T	T	S												G	G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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