PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c1my6A_

Fold library id	PDB Header	Molecule	Title
c1my6A_	PDB header: oxidoreductase	Chain: A: PDB Molecule: iron (iii) superoxide dismutase;	PDBTitle: the 1.6 a structure of fe-superoxide dismutase from the2 thermophilic cyanobacterium thermosynechococcus elongatus3 : correlation of epr and structural characteristics

Links to external resources
Added to library: Tue Mar 16 14:04:24 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A F V Q E P L P F D P G A L E P Y G M S A K T L E F H Y G K H H K G Y V D N L N K L T Q D T E L A D K S L E D V I R T T Y G D A A K V G I F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T T G G G T
T T T S G G G G S
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N N A A Q V W N H T F F W N S L K P G G G G V P T G D V A A R I N S A F G S Y D E F K A Q F K N A A A T Q F G S G W A W L V L E A G T L K V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T B
T T
S
S S
S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . .

Sequence T K T A N A E N P L V H G Q V P L L T I D V W E H A Y Y L D Y Q N R R P D F I D N F L N Q L V N W D F V A K N L A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G G T
S G G G T T T
T B

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	F	V	Q	E	P	L	P	F	D	P	G	A	L	E	P	Y	G	M	S	A	K	T	L	E	F	H	Y	G	K	H	H	K	G	Y	V	D	N	L	N	K	L	T	Q	D	T	E	L	A	D	K	S	L	E	D	V	I	R	T	T	Y	G	D	A	A	K	V	G	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S		T	T	T	T	G	G	G	T												T														T	T	S	G	G	G	G	S										T	T		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	N	A	A	Q	V	W	N	H	T	F	F	W	N	S	L	K	P	G	G	G	G	V	P	T	G	D	V	A	A	R	I	N	S	A	F	G	S	Y	D	E	F	K	A	Q	F	K	N	A	A	A	T	Q	F	G	S	G	W	A	W	L	V	L	E	A	G	T	L	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	B		T	T			S															S	S																	S	S									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Sequence	T	K	T	A	N	A	E	N	P	L	V	H	G	Q	V	P	L	L	T	I	D	V	W	E	H	A	Y	Y	L	D	Y	Q	N	R	R	P	D	F	I	D	N	F	L	N	Q	L	V	N	W	D	F	V	A	K	N	L	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T			G	G	G	G	T										S	G	G	G	T					T	T													T	B