PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1mldA_

Fold library id	PDB Header	Molecule	Title
c1mldA_	PDB header: oxidoreductase(nad(a)-choh(d))	Chain: A: PDB Molecule: malate dehydrogenase;	PDBTitle: refined structure of mitochondrial malate dehydrogenase2 from porcine heart and the consensus structure for3 dicarboxylic acid oxidoreductases

Links to external resources
Added to library: Tue Mar 16 13:14:12 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A K V A V L G A S G G I G Q P L S L L L K N S P L V S R L T L Y D I A H T P G V A A D L S H I E T R A T V K G Y L G P E Q L P D C L K G C D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S T T T
T T
S S S S T T S S S S
S G G G T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V V V I P A G V P R K P G M T R D D L F N T N A T I V A T L T A A C A Q H C P D A M I C I I S N P V N S T I P I T A E V F K K H G V Y N P N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
G G G G
T T S
S S
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K I F G V T T L D I V R A N A F V A E L K G L D P A R V S V P V I G G H A G K T I I P L I S Q C T P K V D F P Q D Q L S T L T G R I Q E A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
G G G
B
S S G G G
G G G
B S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence T E V V K A K A G A G S A T L S M A Y A G A R F V F S L V D A M N G K E G V V E C S F V K S Q E T D C P Y F S T P L L L G K K G I E K N L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S
T
T T
S S S S S T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . .

Sequence I G K I S P F E E K M I A E A I P E L K A S I K K G E E F V K N M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	K	V	A	V	L	G	A	S	G	G	I	G	Q	P	L	S	L	L	L	K	N	S	P	L	V	S	R	L	T	L	Y	D	I	A	H	T	P	G	V	A	A	D	L	S	H	I	E	T	R	A	T	V	K	G	Y	L	G	P	E	Q	L	P	D	C	L	K	G	C	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	S	T	T										T		T	T		S							S	S	S									T	T	S	S	S	S								S	G	G	G						T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	V	V	I	P	A	G	V	P	R	K	P	G	M	T	R	D	D	L	F	N	T	N	A	T	I	V	A	T	L	T	A	A	C	A	Q	H	C	P	D	A	M	I	C	I	I	S	N	P	V	N	S	T	I	P	I	T	A	E	V	F	K	K	H	G	V	Y	N	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S					T	T			G	G	G	G																				T	T	S						S	S																T	T				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	I	F	G	V	T	T	L	D	I	V	R	A	N	A	F	V	A	E	L	K	G	L	D	P	A	R	V	S	V	P	V	I	G	G	H	A	G	K	T	I	I	P	L	I	S	Q	C	T	P	K	V	D	F	P	Q	D	Q	L	S	T	L	T	G	R	I	Q	E	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																				T	T			G	G	G		B							S	S	G	G	G					G	G	G		B	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	E	V	V	K	A	K	A	G	A	G	S	A	T	L	S	M	A	Y	A	G	A	R	F	V	F	S	L	V	D	A	M	N	G	K	E	G	V	V	E	C	S	F	V	K	S	Q	E	T	D	C	P	Y	F	S	T	P	L	L	L	G	K	K	G	I	E	K	N	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S		S																						T		T	T											S	S	S	S	S										T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Sequence	I	G	K	I	S	P	F	E	E	K	M	I	A	E	A	I	P	E	L	K	A	S	I	K	K	G	E	E	F	V	K	N	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																												T	T