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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1mg1A_

Fold library idPDB HeaderMoleculeTitle
c1mg1A_PDB header: viral proteinChain: A: PDB Molecule: protein (htlv-1 gp21 ectodomain/maltose-bindingPDBTitle: htlv-1 gp21 ectodomain/maltose-binding protein chimera


Added to library: Tue Mar 16 12:10:00 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSG
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Known secondary structure (DSSP)




TTS
TTT





TTTT
S
SGGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGK
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Known secondary structure (DSSP)





TTGGGTB
TTTT


TTT
SS

SBGGGTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAE
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Known secondary structure (DSSP)



SSTT

SSSSSSTTSS
SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence AAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYL
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Known secondary structure (DSSP) TTS
GGGTT




TT


TT
S
TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGR
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Known secondary structure (DSSP) SSTTS


SBTTTTSS


STTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence QTVDAALAAAQTNAAAMSLASGKSLLHEVDKDISQLTQAIVKNHKNLLKIAQYAAQNRRGLDLLFWEQGG
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Known secondary structure (DSSP) S
TTS


TGGGT
 .........430.........440.........450
Sequence LCKALQEQCCFLNITNSHVSILQERPPLEN
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Known secondary structure (DSSP) TTS











S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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