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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1m6bB_

Fold library idPDB HeaderMoleculeTitle
c1m6bB_PDB header: signaling protein, transferaseChain: B: PDB Molecule: receptor protein-tyrosine kinase erbb-3;PDBTitle: structure of the her3 (erbb3) extracellular domain


Added to library: Wed Jan 9 19:50:13 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQAVCPGTRCEVVMGNLEIVLTGHNADLSFLQWVREVTGYVLVAMNEFSTLPLPNLRVVRGTQVYDGKFA
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Known secondary structure (DSSP)






SS
S

TT


GGGTT

SS
S


S
TT



SS
BTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IFVMLNYNTNSSHALRQLRLTQLTEILSGGVYIEKNDKLCHMDTIDWRDIVRDRDAEIVVKDNGRSCPPC
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Known secondary structure (DSSP)

B
TTSS
B


TT

SS


TT

STTTS
B

TT

S

SS



 .........150.........160.........170.........180.........190.........200.........210
Sequence HEVCKGRCWGPGSEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGPQDTDCFACRHFNDSGACV
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Known secondary structure (DSSP)
GGGTS
BSSSSSS
B








GGGTT
BSSSSTT
B

TTBSS
BSSSSTTSBSSBSSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence PRCPQPLVYNKLTFQLEPNPHTKYQYGGVCVASCPHNFVVDQTSCVRACPPDKMEVDKNGLKMCEPCGGL
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Known secondary structure (DSSP) SS


STTTT
TT

TTSS

TT
TTSS

TTTT
SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence CPKACEGTGSGSRFQTVDSSNIDGFVNCTKILGNLDFLITGLNGDPWHKIPALDPEKLNVFRTVREITGY
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Known secondary structure (DSSP)



BSTTSS
SS

TTTGGGGTT
SSB


TTS





GGGGGGGTT

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LNIQSWPPHMHNFSVFSNLTTIGGRSLYNRGFSLLIMKNLNVTSLGFRSLKEISAGRIYISANRQLCYHH
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Known secondary structure (DSSP) S


TT

S
GGGTT



SS
SSSSS
TT





TT


SS

TT

S
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence SLNWTKVLRGPTEERLDIKHNRPRRDCVAEGKVCDPLCSSGGCWGPGPGQCLSCRNYSRGGVCVTHCNFL
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Known secondary structure (DSSP) S

GGGTB
S

TT
SSS
T
S

TTB
TT
BSSSSGGGBSSBSSTTS


SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence NGEPREFAHEAECFSCHPECQPMEGTATCNGSGSDTCAQCAHFRDGPHCVSSCPHGVLGAKGPIYKYPDV
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Known secondary structure (DSSP) SSSS
TT

TTB


SSS
SBSSSSTTSBSSBSSTTSS

BSSS
T
 .........570.........580....
Sequence QNECRPCHENCTQGCKGPELQDCL
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Known secondary structure (DSSP) TSB

TT
SS

SSSSTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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