Fold library entry viewer: c1m53A_

Added to library: Tue Mar 16 13:20:21 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	Y	P	A	W	W	K	E	A	V	F	Y	Q	I	Y	P	R	S	F	K	D	T	N	D	D	G	I	G	D	I	R	G	I	I	E	K	L	D	Y	L	K	S	L	G	I	D	A	I	W	I	N	P	H	Y	D	S	P	N	T	D	N	G	Y	D	I	S	N	Y	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																G	G	G	T			S	S	S	S	S	S									T								T															T	T	T	T	S	S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	M	K	E	Y	G	T	M	E	D	F	D	S	L	V	A	E	M	K	K	R	N	M	R	L	M	I	D	V	V	I	N	H	T	S	D	Q	H	P	W	F	I	Q	S	K	S	D	K	N	N	P	Y	R	D	Y	Y	F	W	R	D	G	K	D	N	Q	P	P	N	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G																T	T										S	B			T	T	S										T	T		T	T	G	G	G	B						S	S	S	S		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	S	F	F	G	G	S	A	W	Q	K	D	A	K	S	G	Q	Y	Y	L	H	Y	F	A	R	Q	Q	P	D	L	N	W	D	N	P	K	V	R	E	D	L	Y	A	M	L	R	F	W	L	D	K	G	V	S	G	M	R	F	D	T	V	A	T	Y	S	K	I	P	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		T	T	S	S	B	S					T	T	T							S	S		T	T			B	B		T	T	S																T	T	T							T	T	G	G	G	S	S			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	N	L	T	P	E	Q	Q	K	N	F	A	E	Q	Y	T	M	G	P	N	I	H	R	Y	I	Q	E	M	N	R	K	V	L	S	R	Y	D	V	A	T	A	G	E	I	F	G	V	P	L	D	R	S	S	Q	F	F	D	R	R	R	H	E	L	N	M	A	F	M	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T					T	T			T	T												T	G	G	G	S									T	T			G	G	G	T						G	G	G		S		S						T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	I	R	L	D	R	D	S	N	E	R	W	R	H	K	S	W	S	L	S	Q	F	R	Q	I	I	S	K	M	D	V	T	V	G	K	Y	G	W	N	T	F	F	L	D	N	H	D	N	P	R	A	V	S	H	F	G	D	D	R	P	Q	W	R	E	A	S	A	K	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	T	B		S	S		T	T		B																				T	T	T			B				S			T	T	S								S			S	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	T	I	T	L	T	Q	R	A	T	P	F	I	Y	Q	G	S	E	L	G	M	T	N	Y	P	F	R	Q	L	N	E	F	D	D	I	E	V	K	G	F	W	Q	D	Y	V	Q	S	G	K	V	T	A	T	E	F	L	D	N	V	R	L	T	S	R	D	N	S	R	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	S	S	S	S						T	T	T	T	T	T								S	G	G	G														T	T	T	T	S	S														G	G	G	G		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	Q	W	N	D	T	L	N	A	G	F	T	R	G	K	P	W	F	H	I	N	P	N	Y	V	E	I	N	A	E	R	E	E	T	R	E	D	S	V	L	N	Y	Y	K	K	M	I	Q	L	R	H	H	I	P	A	L	V	Y	G	A	Y	Q	D	L	N	P	Q	D	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	G	G	G	G	S		S	S			S	S				G	G	G	G	T	S									T	T	S																					S					S		T	T		S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Sequence	V	Y	A	Y	T	R	T	L	G	N	E	R	Y	L	V	V	V	N	F	K	E	Y	P	V	R	Y	T	L	P	A	N	D	A	I	E	E	V	V	I	D	T	Q	Q	Q	A	A	A	P	H	S	T	S	L	S	L	S	P	W	Q	A	G	V	Y	K	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T										S	S	S								T	T										S		S	S						S	S						T	T

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PDB structure

FASTA sequence

Hidden Markov model

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