Fold library entry viewer: c1m1cB_

Added to library: Tue Mar 16 12:57:12 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	L	R	F	V	T	K	N	S	Q	D	K	S	S	D	L	F	S	I	C	S	D	R	G	T	F	V	A	H	N	R	V	R	T	D	F	K	F	D	N	L	V	F	N	R	V	Y	G	V	S	Q	K	F	T	L	V	G	N	P	T	V	C	F	N	E	G	S	S	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	S	S	S										S	S	S															T	T																B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	G	I	A	K	K	Y	L	T	L	D	G	G	L	A	I	D	N	V	L	N	E	L	R	S	T	C	G	I	P	G	N	A	V	A	S	H	A	Y	N	I	T	S	W	R	W	Y	D	N	H	V	A	L	L	M	N	M	L	R	A	Y	H	L	Q	V	L	T	E	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	B	T	T	T	B		S	S	S		B							T	T	G	G	G	T	S	S			T	T										T	T	T					B		T	T																		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	Y	S	A	G	D	I	P	M	Y	H	D	G	H	V	K	I	K	L	P	V	T	I	D	D	T	A	G	P	T	Q	F	A	W	P	S	D	R	S	T	D	S	Y	P	D	W	A	Q	F	S	E	S	F	P	S	I	D	V	P	Y	L	D	V	R	P	L	T	V	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S								S	S		S	T	T	S		S	S				S	S		T	T	T	S											S	S			S	S	S						T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	N	F	V	L	M	M	M	S	K	W	H	R	R	T	N	L	A	I	D	Y	E	A	P	Q	L	A	D	K	F	A	Y	R	H	A	L	T	V	Q	D	A	D	E	W	I	E	G	D	R	T	D	D	Q	F	R	P	P	S	S	K	V	M	L	S	A	L	R	K	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		B				S	S	B	G	G	G			B			S		S							S	S									T	S	S	S	S		S	G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	H	N	R	L	Y	N	Q	F	Y	T	A	A	Q	L	L	A	Q	I	M	M	K	P	V	P	N	C	A	E	G	Y	A	W	L	M	H	D	A	L	V	N	I	P	K	F	G	S	I	R	G	R	Y	P	F	L	L	S	G	D	A	A	L	I	Q	A	T	A	L	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T																S						S	S	G	G	G		T	T	T	T											B		B	S	S	S		G	G	G	S		S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	W	S	A	I	M	A	K	P	E	L	V	F	T	Y	A	M	Q	V	S	V	A	L	N	T	G	L	Y	L	R	R	V	K	K	T	G	F	G	T	T	I	D	D	S	Y	E	D	G	A	F	L	Q	P	E	T	F	V	Q	A	A	L	A	C	C	T	G	Q	D	A	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T																											T	T	T	T			S		T	T			G	G	G	G	S													S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	G	M	S	D	V	Y	V	T	Y	P	D	L	L	E	F	D	A	V	T	Q	V	P	I	T	V	I	E	P	A	G	Y	N	I	V	D	D	H	L	V	V	V	G	V	P	V	A	C	S	P	Y	M	I	F	P	V	A	A	F	D	T	A	N	P	Y	C	G	N	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S	S						G	G	G	S	S	T	T						B				S				S				S	S	S	B					S					S		S	G	G	G	T	T				S	S	S			T	T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	K	A	A	N	K	Y	L	R	K	G	A	V	Y	D	K	L	E	A	W	K	L	A	W	A	L	R	V	A	G	Y	D	T	H	F	K	V	Y	G	D	T	H	G	L	T	K	F	Y	A	D	N	G	D	T	W	T	H	I	P	E	F	V	T	D	G	D	V	M	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S			S	S																				T								S	S			T	T			B			B		S	T	T			B				G	G	G	S	S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	V	T	A	I	E	R	R	A	R	H	F	V	E	L	P	R	L	N	S	P	A	F	F	R	S	V	E	V	S	T	T	I	Y	D	T	H	V	Q	A	G	A	H	A	V	Y	H	A	S	R	I	N	L	D	Y	V	K	P	V	S	T	G	I	Q	V	I	N	A	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S			S					T	T	S	T	T	T																		S	S	S	S		B							S	T	T	T					T	T					S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.
Sequence	L	K	N	Y	W	G	S	V	R	R	T	Q	Q	G	L	G	V	V	G	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T									S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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