Fold library entry viewer: c1lfgA_

Added to library: Tue Mar 16 13:40:08 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	R	R	R	S	V	Q	W	C	A	V	S	N	P	E	A	T	K	C	F	Q	W	Q	R	N	M	R	K	V	R	G	P	P	V	S	C	I	K	R	D	S	P	I	Q	C	I	Q	A	I	A	E	N	R	A	D	A	V	T	L	D	G	G	F	I	Y	E	A	G	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S																	T	T										S	S										T	T	S			B													S	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	Y	K	L	R	P	V	A	A	E	V	Y	G	T	E	R	Q	P	R	T	H	Y	Y	A	V	A	V	V	K	K	G	G	S	F	Q	L	N	E	L	Q	G	L	K	S	C	H	T	G	L	R	R	T	A	G	W	N	V	P	I	G	T	L	R	P	F	L	N	W	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T													T	T				S										T	T					T	T			T	T	S					S		T	T		T	T	T	T								G	G	G	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	P	E	P	I	E	A	A	V	A	R	F	F	S	A	S	C	V	P	G	A	D	K	G	Q	F	P	N	L	C	R	L	C	A	G	T	G	E	N	K	C	A	F	S	S	Q	E	P	Y	F	S	Y	S	G	A	F	K	C	L	K	D	G	A	G	D	V	A	F	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S										S	S					T	T	S		T	T	T						T	T					S	T	T	T	T		S	S	T	T	S	T	T												T	T	S		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	S	T	V	F	E	D	L	S	D	E	A	E	R	D	E	Y	E	L	L	C	P	D	N	T	R	K	P	V	D	K	F	K	D	C	H	L	A	R	V	P	S	H	A	V	V	A	R	S	V	N	G	K	E	D	A	I	W	N	L	L	R	Q	A	Q	E	K	F	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								S	T	T	T	G	G	G						T	T	T					T	T		G	G	G	S		S												S	S	S																		S	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	K	S	P	K	F	Q	L	F	G	S	P	S	G	Q	K	D	L	L	F	K	D	S	A	I	G	F	S	R	V	P	P	R	I	D	S	G	L	Y	L	G	S	G	Y	F	T	A	I	Q	N	L	R	K	S	E	E	E	V	A	A	R	R	A	R	V	V	W	C	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S		S	S			T	T				T	T		S		S	S	S		T	T									T	T																	G	G	G	S											S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	E	Q	E	L	R	K	C	N	Q	W	S	G	L	S	E	G	S	V	T	C	S	S	A	S	T	T	E	D	C	I	A	L	V	L	K	G	E	A	D	A	M	S	L	D	G	G	Y	V	Y	T	A	G	K	C	G	L	V	P	V	L	A	E	N	Y	K	S	A	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S													T	T	T	T	S							S	S										T	T	S			B														T	T												S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	D	P	D	P	N	C	V	D	R	P	V	E	G	Y	L	A	V	A	V	V	R	R	S	D	T	S	L	T	W	N	S	V	K	G	K	K	S	C	H	T	A	V	D	R	T	A	G	W	N	I	P	M	G	L	L	F	N	Q	T	G	S	C	K	F	D	E	Y	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		T	T	G	G	G	S													T	T		T	T			G	G	G		T	T	S					S		T	T		T	T	T	T																G	G	G	S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	S	C	A	P	G	S	D	P	A	S	N	L	C	A	L	C	I	G	D	E	E	G	E	N	K	C	V	P	N	S	N	E	R	Y	Y	G	Y	T	G	A	F	R	C	L	A	E	N	A	G	D	V	A	F	V	K	D	V	T	V	L	Q	N	T	D	G	N	N	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S		T	T	S	G	G	G	T	T				S	T	T	S		S	T	T		S	S	T	T	S	T	T												T	T	S		S						T						T	S	S	S	S			S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	W	A	K	D	L	K	L	A	D	F	A	L	L	C	L	D	G	K	R	K	P	V	T	E	A	R	S	C	H	L	A	M	A	P	N	H	A	V	V	S	R	M	D	K	V	E	R	L	K	Q	V	L	L	H	Q	Q	A	K	F	G	R	N	G	S	D	C	P	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	T			G	G	G						T	T	S					G	G	G	G	G	G	S		S												G	G	G																S	T	T		T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
Sequence	F	C	L	F	Q	S	E	T	K	N	L	L	F	N	D	N	T	E	C	L	A	R	L	H	G	K	T	T	Y	E	K	Y	L	G	P	Q	Y	V	A	G	I	T	N	L	K	K	C	S	T	S	P	L	L	E	A	C	E	F	L	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		S	T	T	S			S	S		T	T								T	T			S																		T	T

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PDB structure

FASTA sequence

Hidden Markov model

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