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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1lekA_

Fold library idPDB HeaderMoleculeTitle
c1lekA_PDB header: immune systemChain: A: PDB Molecule: h-2 class i histocompatibility antigen, k-bPDBTitle: crystal structure of h-2kbm3 bound to dev8


Added to library: Tue Mar 16 12:48:44 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRARWMEQEGPEYWERETQKAKGN
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Known secondary structure (DSSP)



TTS
S
TTTTSSS



SGGGGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence EQSFRVSLRTLLGYYNQSAGGSHTIQVISGCEVGSDGRLLRGYQQYAYDGDYIALNEDLKTWTAADMAAL
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Known secondary structure (DSSP) TT

TTS


TTS





TTSS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ITKHKWEQAGEAERLRAYLEGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVTLRCWALGFYPA
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Known secondary structure (DSSP) TTTT

B


TTSBSS
 .........220.........230.........240.........250.........260.........270...
Sequence DITLTWQLNGEELIQDMELVETRPAGDGTFQKWASVVVPLGKEQYYTCHVYHQGLPEPLTLRW
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Known secondary structure (DSSP)

TT
GGG




SSS
TT
GGG
TT
SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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