Fold library entry viewer: c1ldkB_

Added to library: Tue Mar 16 13:37:03 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	A	Q	S	S	S	K	S	P	E	L	L	A	R	Y	C	D	S	L	L	K	K	S	S	K	N	P	E	E	A	E	L	E	D	T	L	N	Q	V	M	V	V	F	K	Y	I	E	D	K	D	V	F	Q	K	F	Y	A	K	M	L	A	K	R	L	V	H	Q	N	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S	S															S			S	S																			T	T		T	T	T	T																S				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	D	D	A	E	A	S	M	I	S	K	L	K	Q	A	C	G	F	E	Y	T	S	K	L	Q	R	M	F	Q	D	I	G	V	S	K	D	L	N	E	Q	F	K	K	H	L	T	N	S	E	P	L	D	L	D	F	S	I	Q	V	L	S	S	G	S	W	P	F	Q	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	S		S	S																												T	T					S									T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	T	F	A	L	P	S	E	L	E	R	S	Y	Q	R	F	T	A	F	Y	A	S	R	H	S	G	R	K	L	T	W	L	Y	Q	L	S	K	G	E	L	V	T	N	C	F	K	N	R	Y	T	L	Q	A	S	T	F	Q	M	A	I	L	L	Q	Y	N	T	E	D	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						S	S	S	T	T	T										T	T		T	T							S	S	S								T	T	S	S	S														T	T	T	T	S	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	V	Q	Q	L	T	D	S	T	Q	I	K	M	D	I	L	A	Q	V	L	Q	I	L	L	K	S	K	L	L	V	L	E	D	E	N	A	N	V	D	E	V	E	L	K	P	D	T	L	I	K	L	Y	L	G	Y	K	N	K	K	L	R	V	N	I	N	V	P	M	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T																T	T	S	S			S	S	S				T	T	T					T	T	S						S	S				S	S	S	S								S	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	Q	K	Q	E	Q	E	T	T	H	K	N	I	E	E	D	R	K	L	L	I	Q	A	A	I	V	R	I	M	K	M	R	K	V	L	K	H	Q	Q	L	L	G	E	V	L	T	Q	L	S	S	R	F	K	P	R	V	P	V	I	K	K	C	I	D	I	L	I	E	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T										T	S	S	T	T					T	T		S	S		B					T	T	T	T	T	T	T	T		T	T					S	S	T	T	S	S	T					G	G	G	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Sequence	Y	L	E	R	V	D	G	E	K	D	T	Y	S	Y	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		S	S	B

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PDB structure

FASTA sequence

Hidden Markov model

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