Fold library entry viewer: c1larB_

Added to library: Tue Mar 16 12:45:34 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	W	E	N	S	N	L	E	V	N	K	P	K	N	R	Y	A	N	V	I	A	Y	D	H	S	R	V	I	L	T	S	I	D	G	V	P	G	S	D	Y	I	N	A	N	Y	I	D	G	Y	R	K	Q	N	A	Y	I	A	T	Q	G	P	L	P	E	T	M	G	D	F	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	T	T	T	G	G	G		S	S	T	T					T	T	T	B							T	T		T	T	T	T			S							T	T													T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	M	V	W	E	Q	R	T	A	T	V	V	M	M	T	R	L	E	E	K	S	R	V	K	C	D	Q	Y	W	P	A	R	G	T	E	T	C	G	L	I	Q	V	T	L	L	D	T	V	E	L	A	T	Y	T	V	R	T	F	A	L	H	K	S	G	S	S	E	K	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T								S		S	B	S	S	S	S	B	S	S				S		S	S	S					T	T												S	S											T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	R	Q	F	Q	F	M	A	W	P	D	H	G	V	P	E	Y	P	T	P	I	L	A	F	L	R	R	V	K	A	C	N	P	L	D	A	G	P	M	V	V	H	C	S	A	G	V	G	R	T	G	C	F	I	V	I	D	A	M	L	E	R	M	K	H	E	K	T	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S	S		S		S														S		T	T								S	S	S	S	S	S																			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	Y	G	H	V	T	C	M	R	S	Q	R	N	Y	M	V	Q	T	E	D	Q	Y	V	F	I	H	E	A	L	L	E	A	A	T	C	G	H	T	E	V	P	A	R	N	L	Y	A	H	I	Q	K	L	G	Q	V	P	P	G	E	S	V	T	A	M	E	L	E	F	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	T	T	S	S																										T	T	S									T	S			T	T		S	S									T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	A	S	S	S	R	F	I	S	A	N	L	P	C	N	K	F	K	N	R	L	V	N	I	M	P	Y	E	L	T	R	V	C	L	Q	P	I	R	G	V	E	G	S	D	Y	I	N	A	S	F	L	D	G	Y	R	Q	Q	K	A	Y	I	A	T	Q	G	P	L	A	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T										S	G	G	G	G	G	G		S	S	T	T					T	T	T	B						B	T	T	B	T	T	T	T			S							S	S	S	T	T										G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	E	D	F	W	R	M	L	W	E	H	N	S	T	I	I	V	M	L	T	K	L	R	E	M	G	R	E	K	C	H	Q	Y	W	P	A	E	R	S	A	R	Y	Q	Y	F	V	V	D	P	M	A	E	Y	N	M	P	Q	Y	I	L	R	E	F	K	V	T	D	A	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T								S		S			T	T			S	S				S		S	S	S					T	T												S	S											T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	Q	S	R	T	I	R	Q	F	Q	F	T	D	W	P	E	Q	G	V	P	K	T	G	E	G	F	I	D	F	I	G	Q	V	H	K	T	K	E	Q	F	G	Q	D	G	P	I	T	V	H	C	S	A	G	V	G	R	T	G	V	F	I	T	L	S	I	V	L	E	R	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S		S	S	S			S	S																		T	T			S						S	S	S	S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Sequence	R	Y	E	G	V	V	D	M	F	Q	T	V	K	T	L	R	T	Q	R	P	A	M	V	Q	T	E	D	Q	Y	Q	L	C	Y	R	A	A	L	E	Y	L	G	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S													T	T	S	T	T	S	S		S

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PDB structure

FASTA sequence

Hidden Markov model

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