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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1l7eC_

Fold library idPDB HeaderMoleculeTitle
c1l7eC_PDB header: oxidoreductaseChain: C: PDB Molecule: nicotinamide nucleotide transhydrogenase,PDBTitle: crystal structure of r. rubrum transhydrogenase domain i2 with bound nadh


Added to library: Tue Mar 16 13:47:03 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADV
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Known secondary structure (DSSP)




STT



S

TT
TTTTGGGT

TT
SSTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQ
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Known secondary structure (DSSP)



GGGSS
SGGGS
TT


GGG
STT
GGG



GGGTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQ
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Known secondary structure (DSSP)
SS
SS

SS





STT

SSTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VESLGGKFIKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEP
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Known secondary structure (DSSP) TTTT


TT
S



TTS




S
TS
TT
TTGGGT
SSTT

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence GKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRDGAIVH
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Known secondary structure (DSSP) TTT
S
GGGGGGGGTTTT


TTSTT
S
 ...
Sequence PAL
Predicted secondary structure


SS confidence


Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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